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NECEvent2014_1_5_scaffold_302

Alias: 1014A0615_scaffold_302

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_302_1
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..91)
DNA (90bp) protein (30aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=153 Tax=Vibrio RepID=RPOZ_VIBC3
NECEvent2014_1_5_scaffold_302_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(146..769)
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1157 Tax=Enterobacteriaceae RepID=KGUA_ECOL5 rbh
gmk; guanylate kinase
NECEvent2014_1_5_scaffold_302_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1027..2709
DNA (1683bp) protein (561aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B
DNA ligase B n=118 Tax=Escherichia RepID=LIGB_ECO45 rbh
ligB; NAD-dependent DNA ligase LigB
NECEvent2014_1_5_scaffold_302_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2706..3323)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli M863 RepID=E9YW54_ECOLX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ83007.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_1_5_scaffold_302_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3615..4439)
DNA (825bp) protein (275aa)
DNA-damage-inducible protein D n=348 Tax=Escherichia RepID=E2QH00_ECOLX rbh
dinD; DNA-damage-inducible protein D
BRO family, N-terminal domain protein {ECO:0000313|EMBL:KEO27446.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_1_5_scaffold_302_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4661..5524)
DNA (864bp) protein (288aa)
Protein yicC n=203 Tax=Escherichia RepID=E2QGZ9_ECOLX rbh
yicC; hypothetical protein
Putative alpha helix protein {ECO:0000313|EMBL:CDN84402.1}; YicC protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
NECEvent2014_1_5_scaffold_302_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5651..6367
DNA (717bp) protein (239aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1033 Tax=Enterobacteriaceae RepID=RNPH_ECO24 rbh
NECEvent2014_1_5_scaffold_302_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6433..7074
DNA (642bp) protein (214aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=705 Tax=Enterobacteriaceae RepID=PYRE_ECO27 rbh
NECEvent2014_1_5_scaffold_302_9
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7111..7707)
DNA (597bp) protein (199aa)
Nucleoid occlusion factor SlmA n=289 Tax=Escherichia RepID=SLMA_ECO27 rbh
slmA; nucleoid occlusion protein
Nucleoid occlusion factor SlmA {ECO:0000256|HAMAP-Rule:MF_01839, ECO:0000256|SAAS:SAAS00010477}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_1_5_scaffold_302_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7814..8272)
DNA (459bp) protein (153aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1234 Tax=Enterobacteriaceae RepID=DUT_ECO5E rbh
NECEvent2014_1_5_scaffold_302_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8250..9470)
DNA (1221bp) protein (407aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EMV52559.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EMV52559.1};; TaxID=1116032 species="Bacteria; Proteobacte
Coenzyme A biosynthesis bifunctional protein CoaBC n=755 Tax=Enterobacteriaceae RepID=COABC_ECOL6 rbh
NECEvent2014_1_5_scaffold_302_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9642..10310
DNA (669bp) protein (223aa)
UPF0758 protein YicR n=849 Tax=Enterobacteriaceae RepID=YICR_ECO24 rbh
radC; DNA repair protein RadC
UPF0758 protein YicR {ECO:0000256|HAMAP-Rule:MF_00018}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Displaying 12 items

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