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NECEvent2014_1_5_scaffold_91_13

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(11936..12949)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized ABC transporter ATP-binding protein ydcT n=95 Tax=Escherichia coli RepID=E2QLZ4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 662
  • Evalue 2.60e-187
  • rbh
ydcT; spermidine/putrescine transporter subunit, membrane component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 662
  • Evalue 7.40e-188
ABC transporter family protein {ECO:0000313|EMBL:EHU24529.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 662
  • Evalue 3.70e-187

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGACGTACGCAGTGGAGTTTGACAACGTCTCACGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATGCTGGGGCCGTCCGGCTCCGGCAAAACCACTTGCCTGCGCCTGATTGCTGGATTCGAACAGCTTTCCGGCGGGGCTATCTCTATTTTTGGTACGCCCGCCAGCAATCTGCCACCGTGGGAGCGGGACGTGAATACTGTCTTCCAGGACTACGCGCTATTTCCGCATATGTCGATTCTTGACAACGTAGCCTACGGGCTGATGGTCAAAGGCGTGAATAAAAAGCAGCGGCATGCAATGGCGCAAGAGGCGCTTGAGAAAGTGGCGTTGGGGTTTGTACAGCAACGTAAACCGTCACAACTTTCTGGTGGTCAGCGCCAGCGAGTCGCCATCGCCAGAGCACTGGTGAACGAACCGCGTGTGTTGTTGCTGGATGAACCGCTCGGCGCGCTGGATCTCAAATTGCGCGAGCAAATGCAGCTTGAGCTGAAAAAGCTGCAACAGTCTCTCGGTATCACTTTTATCTTCGTTACCCACGATCAGGGCGAAGCGTTATCGATGTCCGATCGGGTGGCGGTTTTCAATAATGGACGCATTGAACAGGTCGATTCCCCGCGTGATCTCTATATGCGCCCGCGCACGCCGTTTGTTGCGGGATTCGTTGGGACATCGAATGTTTTTGATGGACTGATGGCAGAGAAACTTTGTGGCATGACGGGAAGCTTCGCACTACGACCGGAACATATCCGCCTCAACACCCCTGGCGAAATGCAGGCTAATGGCACGATCCAGGCGGTGCAATATCAGGGCGCAGCGACCCGTTTTGAACTGACACTGAGCGGCGGTGAAAAACTGCTGGTGAGTCAGGCCAATATGACAGGCGAAGAACTGCCTGCCACGCTCACGCCCGGACAACAGGTGATGGTTTCCTGGTCGCGTGATGTGATGGTGGCGCTGGTTGAGGAGAGGTGA
PROTEIN sequence
Length: 338
MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGTPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEKVALGFVQQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNVFDGLMAEKLCGMTGSFALRPEHIRLNTPGEMQANGTIQAVQYQGAATRFELTLSGGEKLLVSQANMTGEELPATLTPGQQVMVSWSRDVMVALVEER*