ggKbase home page

NECEvent2014_1_5_scaffold_91_14

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12967..14112)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, solute-binding protein n=7 Tax=Escherichia coli RepID=E9U5Q6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 381.0
  • Bit_score: 802
  • Evalue 2.40e-229
  • rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ESD33648.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 381.0
  • Bit_score: 802
  • Evalue 3.40e-229
ydcS; putative spermidine/putrescine ABC transporter periplasmic-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 381.0
  • Bit_score: 798
  • Evalue 9.80e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTTACCATGACATTAATGACCGCCCACGCCGCCGAACCTCCCACAAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAGTACGACTGGGTAACGCAATTCGAAAAAGAGACAGGCTGCGCGGTGAATGTTAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGGCCAAAGGGGGTTACGATCTGGTTACGGCATCCGGCGATGCCTCGCTGCGTTTGATTATGGGCAAACGCGTGCAGCCAATTAATACCGCCTTGATTCCCAACTGGAAAGCGCTCGATCCGCGCGTGGTTAAAGGCGACTGGTTTAACGTTGGCGGCAAAGTTTACGGCACACCTTACCAATGGGGGCCGAACCTGCTGATGTACAACACTAAAACCTTCCCGACGCCGCCGGATAGCTGGCAAGTGGTTTTTGTTGAGCAGAATCTGCCGGACGGCAAGAGCAATAAAGGCCGGGTACAGGCTTATGATGGCCCTATCTACATTGCGGATGCCGCGTTGTTCGTCAAAGCCACGCAGCCACAGTTGGGCATCAGTGATCCGTATCAACTCACCGAAGAACAGTATCAGGCGGTGCTGAAAGTGCTGCGCGATCAACATAATTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTGGCTTCCAGTGCATGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTCGCTACCGTTTTCCCGAAGGAGGGCGTTACCGGTTGGGCTGACACCACCATGCTACATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACCCCAAAAGTGCAGGGCGATGTGGCGGCCTGGTTTGGCTCGTTACCAGTAGTGCCGCAAGGGTGTAAAGCCAGTCCGTTATTAGGCGAGAAAGGTTGTGAAACAAACGGTTTTAACTATTTCGATAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTACATTGCCATTATGGGCGGTCGCTAA
PROTEIN sequence
Length: 382
MSKTFARSSLCALTMTLMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKALDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHNLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPQGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR*