ggKbase home page

NECEvent2014_1_5_scaffold_112

Alias: 1014A0615_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_112_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

228..992
DNA (765bp) protein (255aa)
Transporter n=3 Tax=Clostridium butyricum RepID=B1QSR2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30079.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
permease
NECEvent2014_1_5_scaffold_112_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1467..2330
DNA (864bp) protein (288aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA4; 4-hydroxy-tetrahydrodipicolinate synthase 2 (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium butyricum RepID=M8J2T4_CLOBU rbh
NECEvent2014_1_5_scaffold_112_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2747..4396
DNA (1650bp) protein (550aa)
Sulfate permease family protein n=3 Tax=Clostridium butyricum RepID=B1QSQ9_CLOBU rbh
Sulfate permease {ECO:0000313|EMBL:ENZ30081.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
yvdB; putative sulfate transporter YvdB
NECEvent2014_1_5_scaffold_112_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4664..5626
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD75_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86236.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminoglycoside phosphotransferase
NECEvent2014_1_5_scaffold_112_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5833..7080
DNA (1248bp) protein (416aa)
Ammonium transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0Q8_CLOBU rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nrgA3; ammonium transporter NrgA
NECEvent2014_1_5_scaffold_112_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7114..7452
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=4 Tax=Clostridium butyricum RepID=B1QY06_CLOBU
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KJZ86241.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
glnB2; nitrogen regulatory protein P-II
NECEvent2014_1_5_scaffold_112_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7950..9350
DNA (1401bp) protein (467aa)
Amino acid carrier protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRL2_CLOBU rbh
Amino acid carrier protein {ECO:0000313|EMBL:ENZ30085.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
amino acid carrier protein AlsT
NECEvent2014_1_5_scaffold_112_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9602..10231
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR60_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30086.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative domain HDIG-containing protein
NECEvent2014_1_5_scaffold_112_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10632..11414
DNA (783bp) protein (261aa)
Chemotaxis protein MotA n=3 Tax=Clostridium butyricum RepID=B1QY09_CLOBU rbh
Putative chemotaxis protein MotA {ECO:0000313|EMBL:EEP52316.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
flagellar motor protein MotA
NECEvent2014_1_5_scaffold_112_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11433..12179
DNA (747bp) protein (249aa)
Chemotaxis protein MotB n=4 Tax=Clostridium butyricum RepID=B1QY10_CLOBU rbh
Putative chemotaxis MotB protein {ECO:0000313|EMBL:EEP52342.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
motB2; motility protein B
NECEvent2014_1_5_scaffold_112_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12452..13120
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QY11_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP52355.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
molecular chaperone
NECEvent2014_1_5_scaffold_112_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13378..14952)
DNA (1575bp) protein (525aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000313|EMBL:KJZ86243.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KJZ86243.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
cshA2; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13)
Cold-shock deAd box protein a n=2 Tax=Clostridium butyricum RepID=M8JYP9_CLOBU rbh
NECEvent2014_1_5_scaffold_112_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15024..15224)
DNA (201bp) protein (67aa)
UPI0003D5D31E related cluster n=1 Tax=unknown RepID=UPI0003D5D31E
Uncharacterized protein {ECO:0000313|EMBL:ETI88407.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_1_5_scaffold_112_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15396..16115)
DNA (720bp) protein (240aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
1-acylglycerol-3-phosphate O-acyltransferase n=2 Tax=Clostridium butyricum RepID=N9YR65_CLOBU rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase
NECEvent2014_1_5_scaffold_112_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16591..19050
DNA (2460bp) protein (820aa)
ctpE; cation-transporting ATPase E (EC:3.6.3.-)
P-type ATPase-metal cation transport n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDB8_CLOBU rbh
Cation-transporting ATPase {ECO:0000313|EMBL:KJZ86229.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_1_5_scaffold_112_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19264..21294
DNA (2031bp) protein (677aa)
Endopeptidase O n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J323_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91055.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
neutral endopeptidase
NECEvent2014_1_5_scaffold_112_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21478..21630
DNA (153bp) protein (51aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QY16_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP52330.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_1_5_scaffold_112_trna_1
unknown

Not on your lists

21820..21891
DNA (72bp)
transferRNA
NECEvent2014_1_5_scaffold_112_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22005..23171)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRM8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91091.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
xerD10; site-specific recombinase XerD
NECEvent2014_1_5_scaffold_112_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23996..24547)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR72_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91090.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dna-binding protein
NECEvent2014_1_5_scaffold_112_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24685..24879
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD93_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91079.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
XRE family transcriptional regulator
NECEvent2014_1_5_scaffold_112_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25075..25368
DNA (294bp) protein (98aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0S9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91080.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_1_5_scaffold_112_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25476..25748
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91077.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_1_5_scaffold_112_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25757..26479
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRN3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30100.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_1_5_scaffold_112_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26479..27222
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR78_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91070.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
xkdC; phage-like element PBSX protein XkdC
NECEvent2014_1_5_scaffold_112_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27236..27517
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD98_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91076.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_1_5_scaffold_112_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27629..28171
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0T5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91072.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_1_5_scaffold_112_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28297..28419
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91083.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_1_5_scaffold_112_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28431..28985
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91087.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_1_5_scaffold_112_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28985..29125
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADA4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91082.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying items 1-30 of 35 in total

View Taxonomy