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NECEvent2014_1_5_scaffold_198

Alias: 1014A0615_scaffold_198

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_198_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..510)
DNA (510bp) protein (170aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX06_CLOBU
tRNAt(6)A37 methylthiotransferase {ECO:0000313|EMBL:KJZ82747.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.
NECEvent2014_1_5_scaffold_198_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(515..1276)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Clostridium butyricum RepID=M8J6U8_CLOBU rbh
NECEvent2014_1_5_scaffold_198_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1285..2229)
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
prmA2; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium butyricum RepID=M8KAM7_CLOBU rbh
NECEvent2014_1_5_scaffold_198_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2402..3064)
DNA (663bp) protein (221aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Clostridium butyricum RepID=M8K2F3_CLOBU rbh
NECEvent2014_1_5_scaffold_198_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3437..4987)
DNA (1551bp) protein (517aa)
Ferredoxin-nitrite reductase n=2 Tax=Clostridium butyricum RepID=B1QX10_CLOBU rbh
Nitrite/sulfite reductase 4Fe-4S domain protein {ECO:0000313|EMBL:EEP55318.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ferredoxin-nitrite reductase
NECEvent2014_1_5_scaffold_198_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5236..5649
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QX12_CLOBU
Flagellar hook-basal body complex protein FliE {ECO:0000313|EMBL:KJZ97764.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
viral A-type inclusion protein repeat
NECEvent2014_1_5_scaffold_198_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5766..6899)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=3 Tax=Clostridium butyricum RepID=B1QX13_CLOBU rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
chaperone protein DnaJ
NECEvent2014_1_5_scaffold_198_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7052..8893)
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=4 Tax=Clostridium butyricum RepID=B1QX14_CLOBU rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; chaperone protein DnaK
NECEvent2014_1_5_scaffold_198_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8989..9594)
DNA (606bp) protein (202aa)
Protein GrpE n=4 Tax=Clostridium butyricum RepID=B1QX15_CLOBU rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales
grpE; protein GrpE
NECEvent2014_1_5_scaffold_198_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9632..10663)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=4 Tax=Clostridium butyricum RepID=B1QX16_CLOBU rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hrcA; heat-inducible transcription repressor HrcA rbh
NECEvent2014_1_5_scaffold_198_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10917..12044)
DNA (1128bp) protein (376aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Clostridium butyricum RepID=C4IDG5_CLOBU rbh
Membrane protein containing HD superfamily hydrolase domain {ECO:0000313|EMBL:KJZ97703.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_1_5_scaffold_198_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12114..13919)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2G3_CLOBU rbh
NECEvent2014_1_5_scaffold_198_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14208..14537)
DNA (330bp) protein (110aa)
Putative lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QX19_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87682.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_1_5_scaffold_198_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14735..15847)
DNA (1113bp) protein (371aa)
Stage II sporulation P family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH57_CLOBU rbh
Stage II sporulation protein P {ECO:0000313|EMBL:ENZ31422.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
stage II sporulation P family protein
NECEvent2014_1_5_scaffold_198_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16076..17059)
DNA (984bp) protein (328aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
gpr; germination protease Gpr (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium butyricum RepID=M8J6W1_CLOBU rbh
NECEvent2014_1_5_scaffold_198_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17268..17531
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=4 Tax=Clostridium butyricum RepID=B1QX22_CLOBU
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
rpsT; 30S ribosomal protein S20
Displaying 16 items

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