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NECEvent2014_1_5_scaffold_225

Alias: 1014A0615_scaffold_225

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_225_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1802
DNA (1800bp) protein (600aa)
Peptidase/S-layer domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K329_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31147.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
S-layer domain-containing protein
NECEvent2014_1_5_scaffold_225_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2026..3879
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=4 Tax=Clostridium butyricum RepID=B1R1A4_CLOBU rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:KJZ91442.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
radical SAM domain-containing methylthiotransferase
NECEvent2014_1_5_scaffold_225_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3863..4564
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7G3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96905.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_1_5_scaffold_225_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4704..6152
DNA (1449bp) protein (483aa)
rng; ribonuclease G (EC:3.1.26.-)
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHU1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84438.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_1_5_scaffold_225_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6298..6609
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=4 Tax=Clostridium butyricum RepID=B1R1A7_CLOBU
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplU; 50S ribosomal protein L21
NECEvent2014_1_5_scaffold_225_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6614..7000
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K324_CLOBU
Ribosomal protein {ECO:0000313|EMBL:KJZ91459.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_1_5_scaffold_225_7

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7005..7304
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=4 Tax=Clostridium butyricum RepID=B1R1A9_CLOBU
50S ribosomal protein L27 {ECO:0000313|EMBL:ETJ16735.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpmA; 50S ribosomal protein L27
NECEvent2014_1_5_scaffold_225_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7613..8902
DNA (1290bp) protein (430aa)
GTPase Obg n=4 Tax=Clostridium butyricum RepID=B1R1B0_CLOBU rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostrid
obg; GTPase Obg
NECEvent2014_1_5_scaffold_225_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9064..9366
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1B1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96898.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative RNA-binding protein, YhbY family
NECEvent2014_1_5_scaffold_225_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9533..10144
DNA (612bp) protein (204aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Clostridium butyricum RepID=B1R1B2_CLOBU rbh
NECEvent2014_1_5_scaffold_225_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10170..10733
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K319_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96789.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative HD superfamily hydrolase of NAD metabolism
NECEvent2014_1_5_scaffold_225_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11016..12290
DNA (1275bp) protein (425aa)
Membrane-bound protein LytR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB86_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96873.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell envelope-related transcriptional attenuator
NECEvent2014_1_5_scaffold_225_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..13222
DNA (906bp) protein (302aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Ribosomal large subunit pseudouridine synthase, RluA family n=3 Tax=Clostridium butyricum RepID=B1R1B5_CLOBU rbh
NECEvent2014_1_5_scaffold_225_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13329..14570)
DNA (1242bp) protein (414aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHS5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84406.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Serine-type D-Ala-D-Ala carboxypeptidase
NECEvent2014_1_5_scaffold_225_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14738..15151
DNA (414bp) protein (138aa)
ComEA protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3T5_CLOBU
ComEA protein {ECO:0000313|EMBL:ENZ31133.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
comEA; ComE operon protein 1
Displaying 15 items

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