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NECEvent2014_1_5_scaffold_245

Alias: 1014A0615_scaffold_245

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_245_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(149..811)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=U2D921_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE04562.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_1_5_scaffold_245_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1169..1588)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M131_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99755.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
restriction endonuclease-like protein
NECEvent2014_1_5_scaffold_245_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2083..3030)
DNA (948bp) protein (316aa)
Phage integrase family protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELR4_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIL09760.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family protein
NECEvent2014_1_5_scaffold_245_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3168..4169)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS69_CLOBU rbh
No significant {ECO:0000313|EMBL:KJZ85324.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GGGtGRT protein
NECEvent2014_1_5_scaffold_245_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4195..4887)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS70_CLOBU rbh
Zinc finger domain {ECO:0000313|EMBL:KJZ97421.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_1_5_scaffold_245_trna_1
unknown

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5309..5392
DNA (84bp)
transferRNA
NECEvent2014_1_5_scaffold_245_6

Not on your lists

comp(5620..5880)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATJ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21945.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_1_5_scaffold_245_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5894..7150)
DNA (1257bp) protein (419aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG60_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35363.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_1_5_scaffold_245_8

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comp(7317..7550)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ20797.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_1_5_scaffold_245_9

Not on your lists

7582..8157
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FB39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ20799.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_1_5_scaffold_245_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8211..9062)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_1_5_scaffold_245_11

Not on your lists

9325..9921
DNA (597bp) protein (199aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU rbh
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sigma-70 region 2 domain-containing protein
NECEvent2014_1_5_scaffold_245_12
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9964..10362)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO62174.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 1
transposase C for
NECEvent2014_1_5_scaffold_245_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10483..12327)
DNA (1845bp) protein (615aa)
Site-specific recombinase, phage integrase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP5_CLOPF rbh
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EDT27943.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
integrase family protein
NECEvent2014_1_5_scaffold_245_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12314..13498)
DNA (1185bp) protein (395aa)
Transposase B for n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP6_CLOPF
Transposase B for {ECO:0000313|EMBL:EDT28065.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Phage integrase family protein
Displaying 15 items

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