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NECEvent2014_1_5_scaffold_260

Alias: 1014A0615_scaffold_260

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_260_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..86
DNA (84bp) protein (28aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1523154 species="Bacteria; Firmicutes; Clostri
ssb1; single-stranded DNA-binding protein 3
NECEvent2014_1_5_scaffold_260_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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115..372
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=4 Tax=Clostridium butyricum RepID=B1QSP9_CLOBU
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsR; 30S ribosomal protein S18
NECEvent2014_1_5_scaffold_260_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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646..975
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSQ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93292.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MazG-like family
NECEvent2014_1_5_scaffold_260_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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996..2933
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC06_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30299.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase domain-containing protein
NECEvent2014_1_5_scaffold_260_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2936..3382
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=4 Tax=Clostridium butyricum RepID=B1QSQ2_CLOBU
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rplI; 50S ribosomal protein L9
NECEvent2014_1_5_scaffold_260_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3395..5290
DNA (1896bp) protein (632aa)
lon3; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_1_5_scaffold_260_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5439..6764
DNA (1326bp) protein (442aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase n=2 Tax=Clostridium butyricum RepID=M8JFM2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_1_5_scaffold_260_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6888..7241)
DNA (354bp) protein (118aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85049.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85049.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1F2_CLOBU
hypothetical protein
NECEvent2014_1_5_scaffold_260_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7387..8187
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
proC2; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=4 Tax=Clostridium butyricum RepID=B1QSQ5_CLOBU rbh
NECEvent2014_1_5_scaffold_260_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8601..9776)
DNA (1176bp) protein (392aa)
NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme n=2 Tax=Clostridium butyricum RepID=M8K939_CLOBU rbh
Malate dehydrogenase {ECO:0000313|EMBL:ENZ30305.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_1_5_scaffold_260_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10110..11396
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium butyricum RepID=C4IMU0_CLOBU rbh
NECEvent2014_1_5_scaffold_260_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11495..11677
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JEB9_CLOBU
Disulfide oxidoreductase {ECO:0000313|EMBL:KHD13921.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hybrid cluster protein-associated redox disulfide domain protein
NECEvent2014_1_5_scaffold_260_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12289..12453
DNA (165bp) protein (55aa)
UPI0003AAA144 related cluster n=1 Tax=unknown RepID=UPI0003AAA144
Bile acid:sodium symporter {ECO:0000313|EMBL:EEP52457.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. Bo
hypothetical protein
Displaying 13 items

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