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NECEvent2014_1_5_scaffold_327

Alias: 1014A0615_scaffold_327

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_327_1
Bacillus xiamenensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..127
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacillus sp. HYC-10 RepID=K2MH63_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKF34653.1}; TaxID=1178537 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus xiamenensis.;"
hypothetical protein
NECEvent2014_1_5_scaffold_327_2
Pseudomonas avellanae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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162..320
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKG29680.1}; TaxID=1154758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas avell
NECEvent2014_1_5_scaffold_327_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(382..1560)
DNA (1179bp) protein (393aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5G5_9CLOT rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:EKQ56202.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley
phage integrase family protein rbh
NECEvent2014_1_5_scaffold_327_4
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1625..2299)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y6E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03377.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
transcriptional regulator, XRE family
NECEvent2014_1_5_scaffold_327_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2459..2686
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03378.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
helix-turn-helix family protein
NECEvent2014_1_5_scaffold_327_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2693..2914
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUF8_9CLOT
DNA binding domain, excisionase family
Uncharacterized protein {ECO:0000313|EMBL:EKQ56205.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
NECEvent2014_1_5_scaffold_327_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2946..3110
DNA (165bp) protein (55aa)
DNA binding domain, excisionase family protein n=2 Tax=Clostridium botulinum B RepID=B2TKJ8_CLOBB
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:ACD22639.1}; Putative HTH DNA-binding protein {ECO:0000313|EMBL:CDH89521.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Cl
DNA binding domain, excisionase family protein
NECEvent2014_1_5_scaffold_327_8

Not on your lists

3280..4350
DNA (1071bp) protein (357aa)
DnaD domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2H3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ21935.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
phage replisome organizer, putative, N-terminal region
NECEvent2014_1_5_scaffold_327_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4331..5026
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z375_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34110.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
NECEvent2014_1_5_scaffold_327_10

Not on your lists

5081..5320
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMV8_CLOBU
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ21933.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
NECEvent2014_1_5_scaffold_327_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5342..6058
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACK5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34108.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BRO domain protein
NECEvent2014_1_5_scaffold_327_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6236..6712)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APT7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34107.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_1_5_scaffold_327_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6853..8955
DNA (2103bp) protein (701aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QSE4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP52303.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_1_5_scaffold_327_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9052..9183)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z4V2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34921.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 14 items

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