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NECEvent2014_2_2_scaffold_50

Alias: 172_002_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_50_1
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..291
DNA (291bp) protein (97aa)
Tetratrico peptide repeat protein (Fragment) n=1 Tax=Actinomyces sp. ICM47 RepID=J0SJY3_9ACTO
Tetratrico peptide repeat protein {ECO:0000313|EMBL:EJG14401.1}; Flags: Fragment;; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces
hypothetical protein
NECEvent2014_2_2_scaffold_50_trna_5
unknown

Not on your lists

comp(364..437)
DNA (74bp)
transferRNA
NECEvent2014_2_2_scaffold_50_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(540..941)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE57_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72645.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_50_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1266..4010
DNA (2745bp) protein (915aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Ac
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8D5_9ACTO rbh
NECEvent2014_2_2_scaffold_50_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4161..4730
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRJ6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72647.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
cytosolic protein
NECEvent2014_2_2_scaffold_50_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4804..6216)
DNA (1413bp) protein (471aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1203556 species="Bacteria; Actinobacteria;
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7A0_9ACTO rbh
NECEvent2014_2_2_scaffold_50_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6352..6723)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8W8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72649.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_50_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6723..7226)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE64_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72650.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_50_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7397..7888)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8E2_9ACTO rbh
peptide deformylase
NECEvent2014_2_2_scaffold_50_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7890..9716)
DNA (1827bp) protein (609aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRK1_9ACTO rbh
NECEvent2014_2_2_scaffold_50_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9776..10192)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7A4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72653.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_50_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10302..10805)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8X4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72654.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_50_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10826..12031)
DNA (1206bp) protein (402aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE70_9ACTO rbh
isoprenoid biosynthesis protein
NECEvent2014_2_2_scaffold_50_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12119..13360)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8E8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72656.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
peptidase M50
NECEvent2014_2_2_scaffold_50_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13363..14634)
DNA (1272bp) protein (424aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRK6_9ACTO rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase
NECEvent2014_2_2_scaffold_50_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14634..15182)
DNA (549bp) protein (183aa)
DivIVA domain repeat protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7B0_9ACTO rbh
DivIVA domain repeat protein {ECO:0000313|EMBL:EPD72658.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_50_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15185..15562)
DNA (378bp) protein (126aa)
DivIVA domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDD2_9ACTO
DivIVA domain protein {ECO:0000313|EMBL:EWC96237.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NECEvent2014_2_2_scaffold_50_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15595..16875)
DNA (1281bp) protein (427aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE76_9ACTO rbh
radical SAM enzyme, Cfr family
NECEvent2014_2_2_scaffold_50_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16872..17783)
DNA (912bp) protein (304aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Ac
Phosphatidate cytidylyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8F4_9ACTO rbh
phosphatidate cytidylyltransferase
NECEvent2014_2_2_scaffold_50_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17783..18340)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRL2_9ACTO rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1203556 species="Bacteria;
ribosome recycling factor
NECEvent2014_2_2_scaffold_50_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18379..19089)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; UMP kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7B6_9ACTO rbh
NECEvent2014_2_2_scaffold_50_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19220..20047)
DNA (828bp) protein (276aa)
Elongation factor Ts n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8Y3_9ACTO rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales;
translation elongation factor Ts
NECEvent2014_2_2_scaffold_50_22
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20073..20903)
DNA (831bp) protein (277aa)
30S ribosomal protein S2 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE83_9ACTO rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S2
NECEvent2014_2_2_scaffold_50_23
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21310..21840
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8G4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72666.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
peptidase M23 family protein
NECEvent2014_2_2_scaffold_50_24
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21899..22810)
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRL6_9ACTO rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
integrase family protein
NECEvent2014_2_2_scaffold_50_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22820..23980)
DNA (1161bp) protein (387aa)
DNA protecting protein DprA n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7C0_9ACTO rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EPD72668.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
DNA protecting protein DprA
NECEvent2014_2_2_scaffold_50_26
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23973..25520)
DNA (1548bp) protein (516aa)
Mg chelatase-like protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8Y8_9ACTO rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EPD72669.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Mg chelatase-like protein
NECEvent2014_2_2_scaffold_50_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25517..25957)
DNA (441bp) protein (147aa)
UPF0102 protein HMPREF1478_01120 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE89_9ACTO
UPF0102 protein HMPREF1478_01120 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;
hypothetical protein
NECEvent2014_2_2_scaffold_50_28
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26089..26388)
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Actinomyces RepID=D4TY55_9ACTO
PF10611 family protein {ECO:0000313|EMBL:EJN46281.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
NECEvent2014_2_2_scaffold_50_29
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26443..27114)
DNA (672bp) protein (224aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A
Ribonuclease H (EC:3.1.26.4)
Ribonuclease n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRM3_9ACTO rbh
Displaying items 1-30 of 125 in total

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