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NECEvent2014_2_2_scaffold_173

Alias: 172_002_scaffold_173

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_173_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
pepR; metallopeptidase, family M16B (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3M7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71398.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_173_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(650..3004)
DNA (2355bp) protein (785aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A560_9ACTO rbh
NECEvent2014_2_2_scaffold_173_3
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3189..3458)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=4 Tax=Actinobacteria RepID=J1LR91_9ACTO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A
30S ribosomal protein S15
NECEvent2014_2_2_scaffold_173_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3699..4688)
DNA (990bp) protein (330aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1203556 species="Bacteria; Actinobacte
Riboflavin biosynthesis protein RibF n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z4T2_9ACTO rbh
riboflavin biosynthesis protein RibF
NECEvent2014_2_2_scaffold_173_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4699..5751)
DNA (1053bp) protein (351aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZN04_9ACTO rbh
tRNA pseudouridine synthase B
NECEvent2014_2_2_scaffold_173_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5757..6206)
DNA (450bp) protein (150aa)
Ribosome-binding factor A n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3M8_9ACTO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A
ribosome-binding factor A
NECEvent2014_2_2_scaffold_173_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6306..9110)
DNA (2805bp) protein (935aa)
Translation initiation factor IF-2 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A564_9ACTO rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;"
translation initiation factor IF-2
NECEvent2014_2_2_scaffold_173_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9579..10607)
DNA (1029bp) protein (343aa)
Transcription termination factor NusA n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAJ4_9ACTO rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Act
NusA antitermination factor
NECEvent2014_2_2_scaffold_173_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10614..11036)
DNA (423bp) protein (141aa)
Ribosome maturation factor RimP n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z4T8_9ACTO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sou
hypothetical protein
NECEvent2014_2_2_scaffold_173_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11078..12160
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZN08_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71407.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
baaA1; trimeric autotransporter adhesin
NECEvent2014_2_2_scaffold_173_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12251..13300)
DNA (1050bp) protein (350aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3N6_9ACTO rbh
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EPD71408.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_173_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13441..15714)
DNA (2274bp) protein (758aa)
exo-alpha-sialidase (EC:3.2.1.18)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A568_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71409.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_173_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15876..17072)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAJ7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71410.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_173_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17516..18541)
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=3 Tax=Actinobacteria RepID=U1R063_9ACTO rbh
NECEvent2014_2_2_scaffold_173_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18544..19056)
DNA (513bp) protein (171aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EDN81162.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDN81162.1};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actino
Acetolactate synthase, small subunit n=3 Tax=Actinomyces RepID=A7BD88_9ACTO rbh
acetolactate synthase, small subunit
NECEvent2014_2_2_scaffold_173_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19056..20822)
DNA (1767bp) protein (589aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" s
Acetolactate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3N9_9ACTO rbh
acetolactate synthase large subunit
NECEvent2014_2_2_scaffold_173_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21156..22748
DNA (1593bp) protein (531aa)
AspT/YidE/YbjL antiporter duplication domain-containing protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A571_9ACTO rbh
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EPD71414.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source
transporter
NECEvent2014_2_2_scaffold_173_18
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23322..23948
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U1T2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF78918.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
NECEvent2014_2_2_scaffold_173_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23997..24152)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAK1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71415.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_2_scaffold_173_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24149..25387)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z4U8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71416.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_173_21
unknown

Not on your lists

comp(25351..25923)
DNA (573bp) protein (191aa)

This feature has no annotations

Displaying 21 items

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