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NECEvent2014_2_2_scaffold_216

Alias: 172_002_scaffold_216

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_216_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
glycogen debranching enzyme GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen debranching enzyme GlgX n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3V8_9ACTO
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EPD71497.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actino
NECEvent2014_2_2_scaffold_216_trna_5
unknown

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comp(570..641)
DNA (72bp)
transferRNA
NECEvent2014_2_2_scaffold_216_trna_4
unknown

Not on your lists

comp(643..713)
DNA (71bp)
transferRNA
NECEvent2014_2_2_scaffold_216_trna_3
unknown

Not on your lists

comp(748..820)
DNA (73bp)
transferRNA
NECEvent2014_2_2_scaffold_216_trna_2
unknown

Not on your lists

comp(877..948)
DNA (72bp)
transferRNA
NECEvent2014_2_2_scaffold_216_trna_1
unknown

Not on your lists

comp(950..1022)
DNA (73bp)
transferRNA
NECEvent2014_2_2_scaffold_216_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1176..3287
DNA (2112bp) protein (704aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; A
glycogen debranching enzyme GlgX
NECEvent2014_2_2_scaffold_216_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3430..3954
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A5F5_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71499.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_216_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3955..5199
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAT5_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71500.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ribonuclease D (modular protein)
NECEvent2014_2_2_scaffold_216_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5210..7111)
DNA (1902bp) protein (634aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z536_9ACTO rbh
deoxyxylulose-5-phosphate synthase
NECEvent2014_2_2_scaffold_216_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7246..9246
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZNA2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71502.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
NECEvent2014_2_2_scaffold_216_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9243..11084
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3W3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71503.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
chloride channel core
NECEvent2014_2_2_scaffold_216_8
Streptococcus sp. 2_1_36FAA, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11302..12624)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=6 Tax=Streptococcus agalactiae RepID=S8XVZ8_STRAG
Uncharacterized protein {ECO:0000313|EMBL:EEY79886.1}; TaxID=469609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. 2_1_36FAA.;"
NECEvent2014_2_2_scaffold_216_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12675..14027)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A5G1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71504.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
deoxyribonuclease/rho motif-related TRAM
NECEvent2014_2_2_scaffold_216_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14024..16111)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAU2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71505.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_216_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16133..16858
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z544_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71506.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
potassium transporter
NECEvent2014_2_2_scaffold_216_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16861..17559
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZNA7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71507.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
TrkA-N domain protein
NECEvent2014_2_2_scaffold_216_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17508..18176)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3W8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71508.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_216_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18176..18556)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A5G7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71509.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
OB-fold tRNA/helicase-type nucleic acid binding protein
NECEvent2014_2_2_scaffold_216_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18558..19190)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAU7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71510.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_216_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19200..19502)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z552_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71511.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_2_scaffold_216_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19669..20796
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZNB2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71512.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
DNA-binding protein
NECEvent2014_2_2_scaffold_216_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20832..21188)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3X1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD71513.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
type I phosphodiesterase/nucleotide pyrophosphatase
Displaying 23 items

View Taxonomy