ggKbase home page

NECEvent2014_2_2_scaffold_190

Alias: 172_002_scaffold_190

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_190_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)
HTH domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K1_9FIRM
HTH domain protein {ECO:0000313|EMBL:EFR32377.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.
transcriptional regulator
NECEvent2014_2_2_scaffold_190_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(347..1192)
DNA (846bp) protein (282aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EFR32366.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EFR32366.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K2_9FIRM rbh
NECEvent2014_2_2_scaffold_190_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1164..2426)
DNA (1263bp) protein (421aa)
FAD binding domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K3_9FIRM rbh
FAD binding domain protein {ECO:0000313|EMBL:EFR32395.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-
L-aspartate oxidase
NECEvent2014_2_2_scaffold_190_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2428..3345)
DNA (918bp) protein (306aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphil
Quinolinate synthetase complex, A subunit n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K4_9FIRM rbh
quinolinate synthase A
NECEvent2014_2_2_scaffold_190_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3640..4650
DNA (1011bp) protein (337aa)
Glycine cleavage T-protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K5_9FIRM rbh
Glycine cleavage T-protein {ECO:0000313|EMBL:EFR32400.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-
glycine cleavage T-protein
NECEvent2014_2_2_scaffold_190_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4816..7296)
DNA (2481bp) protein (827aa)
Efflux ABC transporter, permease protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K6_9FIRM rbh
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFR32371.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus
efflux ABC transporter, permease protein
NECEvent2014_2_2_scaffold_190_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7280..7957)
DNA (678bp) protein (226aa)
ABC transporter, ATP-binding protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0K7_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR32417.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
ABC transporter ATP-binding protein
NECEvent2014_2_2_scaffold_190_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8046..8918)
DNA (873bp) protein (291aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incerta
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MUR9_9FIRM rbh
Signal transduction histidine kinase
NECEvent2014_2_2_scaffold_190_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8906..9574)
DNA (669bp) protein (223aa)
Putative response regulator ArlR n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV1_9FIRM rbh
Putative response regulator ArlR {ECO:0000313|EMBL:EFR32605.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
transcriptional regulator
NECEvent2014_2_2_scaffold_190_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9944..13945)
DNA (4002bp) protein (1334aa)
Efflux ABC transporter, permease protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV2_9FIRM rbh
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFR32572.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus
permease domain protein
NECEvent2014_2_2_scaffold_190_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13953..14720)
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV3_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR32571.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
putative ABC transporter ATP-binding protein MJ1508
NECEvent2014_2_2_scaffold_190_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..15275)
DNA (456bp) protein (152aa)
SsrA-binding protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV4_9FIRM rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source=
smpB; SsrA-binding protein
NECEvent2014_2_2_scaffold_190_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15268..17370)
DNA (2103bp) protein (701aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=908338 species="Bacteria; Firmicutes; Clostrid
rnr; Ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV5_9FIRM rbh
NECEvent2014_2_2_scaffold_190_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17370..18542)
DNA (1173bp) protein (391aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV6_9FIRM rbh
NECEvent2014_2_2_scaffold_190_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18547..20100)
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostr
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV7_9FIRM rbh
D-alanyl-D-alanine-adding enzyme
NECEvent2014_2_2_scaffold_190_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20110..20880)
DNA (771bp) protein (257aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV8_9FIRM rbh
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFR32623.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
alpha/beta hydrolase fold protein
NECEvent2014_2_2_scaffold_190_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20867..21313)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZV9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32556.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
NECEvent2014_2_2_scaffold_190_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21420..21659
DNA (240bp) protein (80aa)
Glutaredoxin n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZW0_9FIRM
Glutaredoxin {ECO:0000313|EMBL:EFR32603.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
NECEvent2014_2_2_scaffold_190_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21698..22591)
DNA (894bp) protein (298aa)
Putative membrane protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZW1_9FIRM rbh
Putative membrane protein {ECO:0000313|EMBL:EFR32587.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V
putative membrane protein
NECEvent2014_2_2_scaffold_190_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22846..23832)
DNA (987bp) protein (329aa)
3D domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZW2_9FIRM rbh
3D domain protein {ECO:0000313|EMBL:EFR32565.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;
3D/G5 domain protein
Displaying 20 items

View Taxonomy