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NECEvent2014_2_2_scaffold_342

Alias: 172_002_scaffold_342

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_342_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EFR32897.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFR32897.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ24_9FIRM
NECEvent2014_2_2_scaffold_342_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(212..841)
DNA (630bp) protein (210aa)
Metallo-beta-lactamase domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ25_9FIRM rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFR32885.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus har
metallo-beta-lactamase superfamily Zn-dependent hydrolase
NECEvent2014_2_2_scaffold_342_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(850..1299)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=908338 species="Bacter
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ26_9FIRM
NECEvent2014_2_2_scaffold_342_4
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1301..3451)
DNA (2151bp) protein (717aa)
RelA/SpoT family protein {ECO:0000313|EMBL:EFA90474.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EFA90474.1};; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilu
relA; GTP pyrophosphokinase (EC:2.7.6.5)
(p)ppGpp synthetase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000304B037 rbh
NECEvent2014_2_2_scaffold_342_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3408..5225)
DNA (1818bp) protein (606aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFR32877.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFR32877.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniph
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ29_9FIRM rbh
single-stranded-DNA-specific exonuclease RecJ
NECEvent2014_2_2_scaffold_342_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5342..6694)
DNA (1353bp) protein (451aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ30_9FIRM rbh
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EFR32870.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptonip
radical SAM domain protein
NECEvent2014_2_2_scaffold_342_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6747..6893)
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ31_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EFR32923.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
hypothetical protein
NECEvent2014_2_2_scaffold_342_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6902..7201)
DNA (300bp) protein (100aa)
Preprotein translocase, YajC subunit n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ32_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EFR32925.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
hypothetical protein
NECEvent2014_2_2_scaffold_342_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7282..8394)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; Queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ33_9FIRM rbh
NECEvent2014_2_2_scaffold_342_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8400..9419)
DNA (1020bp) protein (340aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:2.4.99.17)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ34_9FIRM rbh
NECEvent2014_2_2_scaffold_342_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9433..10551)
DNA (1119bp) protein (373aa)
Putative amidase enhancer n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ35_9FIRM rbh
Putative amidase enhancer {ECO:0000313|EMBL:EFR32895.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V
sporulation protein SpoIID
NECEvent2014_2_2_scaffold_342_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10553..11554)
DNA (1002bp) protein (334aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridial
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ36_9FIRM rbh
NECEvent2014_2_2_scaffold_342_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11541..12143)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; crossover junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ37_9FIRM rbh
NECEvent2014_2_2_scaffold_342_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12143..12253)
DNA (111bp) protein (37aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ38_9FIRM
Displaying 14 items

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