ggKbase home page

NECEvent2014_2_2_scaffold_14

Alias: 172_002_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_14_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..877)
DNA (876bp) protein (292aa)
Transposase, Mutator family n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PNN3_FINMA rbh
Transposase, Mutator family {ECO:0000313|EMBL:EFK94841.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col
transposase
NECEvent2014_2_2_scaffold_14_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(952..1584)
DNA (633bp) protein (211aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=866779 species="Bacteria; Firmic
Thymidine kinase n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0N3_FINMA rbh
thymidine kinase
NECEvent2014_2_2_scaffold_14_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1586..2170)
DNA (585bp) protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0N4_FINMA rbh
peptidyl-prolyl cis-trans isomerase
NECEvent2014_2_2_scaffold_14_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2211..2909)
DNA (699bp) protein (233aa)
DNA-binding response regulator n=4 Tax=Finegoldia magna RepID=B0S191_FINM2 rbh
DNA-binding response regulator
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EGS33763.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" sour
NECEvent2014_2_2_scaffold_14_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2917..3981)
DNA (1065bp) protein (355aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0N6_FINMA rbh
selenophosphate synthetase
NECEvent2014_2_2_scaffold_14_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3995..4633)
DNA (639bp) protein (213aa)
ComEA protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0N7_FINMA rbh
ComEA protein {ECO:0000313|EMBL:EGS33736.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
late competence protein
NECEvent2014_2_2_scaffold_14_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4732..6501)
DNA (1770bp) protein (590aa)
NlpC/P60 family protein n=2 Tax=Finegoldia magna RepID=D9PS76_FINMA rbh
NlpC/P60 family protein {ECO:0000313|EMBL:EFL54915.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
putative N-acetylmuramoyl-L-alanine amidase
NECEvent2014_2_2_scaffold_14_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6707..7264)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=4 Tax=Finegoldia magna RepID=RRF_FINM2 rbh
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1459804 species="Bacteria;
NECEvent2014_2_2_scaffold_14_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7257..7976)
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=4 Tax=Finegoldia magna RepID=B0S186_FINM2 rbh
uridylate kinase
NECEvent2014_2_2_scaffold_14_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8098..8772)
DNA (675bp) protein (225aa)
Elongation factor Ts n=4 Tax=Finegoldia magna RepID=EFTS_FINM2 rbh
translation elongation factor Ts rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostrid
NECEvent2014_2_2_scaffold_14_11
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8851..9660)
DNA (810bp) protein (270aa)
30S ribosomal protein S2 n=4 Tax=Finegoldia magna RepID=RS2_FINM2 rbh
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Co
NECEvent2014_2_2_scaffold_14_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9775..11841)
DNA (2067bp) protein (689aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=866779 species="Bacteria; Firmicutes
DNA topoisomerase 1 n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0P3_FINMA rbh
topoisomerase I
NECEvent2014_2_2_scaffold_14_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11861..12403)
DNA (543bp) protein (181aa)
Putative adenylyl cyclase CyaB n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0P4_FINMA rbh
Putative adenylyl cyclase CyaB {ECO:0000313|EMBL:EGS33796.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC
adenylate cyclase 2
NECEvent2014_2_2_scaffold_14_14
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12405..13085)
DNA (681bp) protein (227aa)
Ser/Thr phosphatase family protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0P5_FINMA rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EGS33766.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY4034
putative phosphoesterase
NECEvent2014_2_2_scaffold_14_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13088..15340)
DNA (2253bp) protein (751aa)
Putative uncharacterized protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0P6_FINMA rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGS33772.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
putative DNA double-strand break repair rad50 ATPase
NECEvent2014_2_2_scaffold_14_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15322..16413)
DNA (1092bp) protein (364aa)
Putative phosphoesterase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S179_FINM2 rbh
putative phosphoesterase rbh
Putative phosphoesterase {ECO:0000313|EMBL:BAG08119.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 293
NECEvent2014_2_2_scaffold_14_17
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16422..16661)
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Finegoldia magna RepID=B0S178_FINM2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXF26958.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
NECEvent2014_2_2_scaffold_14_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16850..17467
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0Q0_FINMA rbh
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source=
regulatory protein
NECEvent2014_2_2_scaffold_14_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17467..17742
DNA (276bp) protein (92aa)
GIY-YIG catalytic domain protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0Q1_FINMA
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EGS33830.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
hypothetical protein
NECEvent2014_2_2_scaffold_14_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17774..18127)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=4 Tax=Finegoldia magna RepID=RL20_FINM2
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" sourc
NECEvent2014_2_2_scaffold_14_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18146..18337)
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=4 Tax=Finegoldia magna RepID=RL35_FINM2
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATC
NECEvent2014_2_2_scaffold_14_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18351..18929)
DNA (579bp) protein (193aa)
Translation initiation factor IF-3 n=4 Tax=Finegoldia magna RepID=B0S173_FINM2 rbh
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia
NECEvent2014_2_2_scaffold_14_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19029..21431)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW28_FINMA rbh
Membrane protein {ECO:0000313|EMBL:EXF26964.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_2_scaffold_14_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21441..23180)
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW29_FINMA rbh
Multidrug ABC transporter {ECO:0000313|EMBL:EXF26965.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
multidrug ABC transporter
NECEvent2014_2_2_scaffold_14_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23170..24897)
DNA (1728bp) protein (576aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KW30_FINMA rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXF26966.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia
multidrug ABC transporter
NECEvent2014_2_2_scaffold_14_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24972..26876)
DNA (1905bp) protein (635aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=2 Tax=Finegoldia magna RepID=D9PS95_FINMA rbh
thrS; threonyl-tRNA synthetase
NECEvent2014_2_2_scaffold_14_27
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27072..28367)
DNA (1296bp) protein (432aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=2 Tax=Finegoldia magna RepID=D9PS96_FINMA rbh
hisS; histidyl-tRNA synthetase
NECEvent2014_2_2_scaffold_14_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28381..29511)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Finegoldia magna RepID=D9PS97_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EXF26969.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_2_scaffold_14_trna_9
unknown

Not on your lists

comp(29566..29636)
DNA (71bp)
transferRNA
NECEvent2014_2_2_scaffold_14_trna_8
unknown

Not on your lists

comp(29643..29714)
DNA (72bp)
transferRNA
Displaying items 1-30 of 141 in total

View Taxonomy