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NECEvent2014_2_3_scaffold_262_1

Organism: NECEvent2014_2_3_UNK

partial RP 8 / 55 BSCG 3 / 51 ASCG 2 / 38 MC: 1
Location: 188..934

Top 3 Functional Annotations

Value Algorithm Source
Clostridium difficile binary toxin regulatory gene, LytTR family n=156 Tax=Clostridium difficile RepID=Q182U3_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 248.0
  • Bit_score: 500
  • Evalue 7.40e-139
  • rbh
cdtR; Clostridium difficile binary toxin regulatorygene, LytTR family similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 499
  • Evalue 6.10e-139
CdtR {ECO:0000313|EMBL:AEC11568.1}; Clostridium difficile binary toxin regulatorygene, LytTR family {ECO:0000313|EMBL:CEJ99230.1}; Response regulator {ECO:0000313|EMBL:CKH38423.1}; TaxID=1496 species= similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 499
  • Evalue 3.00e-138

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
GTGGATATATTAATCTTTGATAATGATGTTTGTTTTGGAATGAAACTAAAAGAAAAAATAAATAATATTTTAATAAAAGAAGGTTTTGATAATGATGTTGTAAGATTATATCATAATGCAAATTTGTTATTAAAAGAGCTTACTGAAAAAAATAAAGTAAGAATATATTTTATAGTTGTAGACGCAAAATATAAGATAAGTAATGAATTATGTGATGGATTATGGATAGCACAAAAAATTAGAGAATCAGATTATATTAGTCCAATCATATTTCTTACAAATCATATAGAAATGATTTTAGGGATCTTCGATTATAGGTTAGAAGTTATGGACTTTATACTAAAACATGATATGGAAATTGCTGAAAGTAAAATAAAAGCTTGTATTAAAATTGCTCACAAAAGATACATTAAAGAAAAAAATTATCGCTCTAATTTTTTTACTATCTATTCAGATTTCTCACTATGGAAAATTTCATTTGATGAAGTTATATATTTTGAAACAAGCACTATTCCACATAAAATAAAATTAGTGACTACTTCTAGAATATTTGAATTCTATAAAAGTTTAAAGTCTTTACCAGATTTAGATGCATGCTTTATCCGTGTACATAAATCTTTTGTAGTTAATAAATATCATATTGTTTCTCTCGACCTAAAGAAAAATAATATTAAAATGAGTAATGGCCATATATGTCGTATATCTAATACATATAGAAATATTTTAAAGAATATTATTAAAACATAA
PROTEIN sequence
Length: 249
VDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVVDAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEIAESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISFDEVIYFETSTIPHKIKLVTTSRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRNILKNIIKT*