ggKbase home page

NECEvent2014_2_3_scaffold_85

Alias: 172_003_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_85_1
unknown

Not on your lists

comp(53..154)
DNA (102bp) protein (34aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_85_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179..1441)
DNA (1263bp) protein (421aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrS; tyrosine--tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8B4_9ACTO rbh
NECEvent2014_2_3_scaffold_85_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1519..2946)
DNA (1428bp) protein (476aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
arlY; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRH5_9ACTO rbh
NECEvent2014_2_3_scaffold_85_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2990..4324)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z770_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72628.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Lipid A core - O-antigen ligase-like protein
NECEvent2014_2_3_scaffold_85_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4445..5665)
DNA (1221bp) protein (407aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8U2_9ACTO rbh
NECEvent2014_2_3_scaffold_85_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5728..6249)
DNA (522bp) protein (174aa)
Arginine repressor n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE38_9ACTO rbh
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
arginine repressor ArgR
NECEvent2014_2_3_scaffold_85_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6323..6811)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8C1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72631.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NAD(P)H dehydrogenase (quinone)
NECEvent2014_2_3_scaffold_85_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6913..9561)
DNA (2649bp) protein (883aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanine--tRNA ligase (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRI1_9ACTO rbh
NECEvent2014_2_3_scaffold_85_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9563..10648)
DNA (1086bp) protein (362aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z779_9ACTO rbh
phenylalanyl-tRNA synthetase, alpha subunit
NECEvent2014_2_3_scaffold_85_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10815..11675
DNA (861bp) protein (287aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8V0_9ACTO rbh
NECEvent2014_2_3_scaffold_85_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11704..12588
DNA (885bp) protein (295aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE45_9ACTO rbh
methionine aminopeptidase
NECEvent2014_2_3_scaffold_85_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12728..13480
DNA (753bp) protein (251aa)
polyphosphate glucokinase (EC:2.7.1.63)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8C3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72636.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_85_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13948..14760
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRI6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72637.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_85_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14840..16177
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z787_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72638.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
alpha-L-fucosidase
NECEvent2014_2_3_scaffold_85_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16181..16924)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8V6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72639.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_85_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16921..17859)
DNA (939bp) protein (313aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1203556 species="Bacteri
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE50_9ACTO rbh
hypothetical protein
NECEvent2014_2_3_scaffold_85_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17896..18573
DNA (678bp) protein (226aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; lipoyltransferase (EC:2.3.1.-)
Octanoyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8D0_9ACTO rbh
NECEvent2014_2_3_scaffold_85_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18570..19637
DNA (1068bp) protein (356aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRJ1_9ACTO rbh
NECEvent2014_2_3_scaffold_85_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19634..21118
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z794_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72643.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
putative o-succinylbenzoate--CoA ligase
NECEvent2014_2_3_scaffold_85_20
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21206..22570
DNA (1365bp) protein (455aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDB4_9ACTO rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDN81188.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odonto
NADH dehydrogenase
NECEvent2014_2_3_scaffold_85_21
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22710..25742
DNA (3033bp) protein (1011aa)
Tetratricopeptide TPR_4 (Fragment) n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KQ96_9ACTO rbh
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:EFU61851.1}; Flags: Fragment;; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral
NB-ARC domain-containing protein
NECEvent2014_2_3_scaffold_85_trna_5
unknown

Not on your lists

comp(25925..25998)
DNA (74bp)
transferRNA
NECEvent2014_2_3_scaffold_85_22
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26101..26502)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE57_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72645.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_85_23
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26827..29571
DNA (2745bp) protein (915aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Ac
pyruvate dehydrogenase E1 component, homodimeric type (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8D5_9ACTO rbh
NECEvent2014_2_3_scaffold_85_24
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29722..30291
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRJ6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72647.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
cytosolic protein
NECEvent2014_2_3_scaffold_85_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30365..31777)
DNA (1413bp) protein (471aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1203556 species="Bacteria; Actinobacteria;
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7A0_9ACTO rbh
NECEvent2014_2_3_scaffold_85_26
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31913..32284)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A8W8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72649.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_85_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32284..32787)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZE64_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72650.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_85_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32958..33449)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8E2_9ACTO rbh
peptide deformylase
NECEvent2014_2_3_scaffold_85_29
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(33451..35277)
DNA (1827bp) protein (609aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZRK1_9ACTO rbh
Displaying items 1-30 of 138 in total

View Taxonomy