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NECEvent2014_2_3_scaffold_99

Alias: 172_003_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_99_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1065)
DNA (1065bp) protein (355aa)
Replicative DNA helicase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZSQ1_9ACTO rbh
Replicative DNA helicase {ECO:0000313|EMBL:EPD73077.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
replicative DNA helicase
NECEvent2014_2_3_scaffold_99_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1409..2782
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9K7_9ACTO rbh
MATE efflux family protein {ECO:0000313|EMBL:EPD73076.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
MATE efflux family protein
NECEvent2014_2_3_scaffold_99_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3048..3338
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=4 Tax=Actinomyces RepID=J3J5B6_9ACTO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S6
NECEvent2014_2_3_scaffold_99_4
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3374..3940
DNA (567bp) protein (189aa)
Single-stranded DNA-binding protein n=3 Tax=Actinomyces RepID=A7BAU7_9ACTO rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411466 species="Bacteria; Actinobacteria; Acti
single-strand binding protein
NECEvent2014_2_3_scaffold_99_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4032..4274
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=4 Tax=Actinomyces RepID=A7BAU6_9ACTO
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
rpsR; 30S ribosomal protein S18
NECEvent2014_2_3_scaffold_99_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4296..4754
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZR2_9ACTO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
ribosomal protein L9
NECEvent2014_2_3_scaffold_99_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5127..7469)
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9K3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73071.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
penicillin-binding protein
NECEvent2014_2_3_scaffold_99_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7614..9080)
DNA (1467bp) protein (489aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actin
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZFB4_9ACTO rbh
6-phosphogluconate dehydrogenase
NECEvent2014_2_3_scaffold_99_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9210..10817)
DNA (1608bp) protein (536aa)
CCA tRNA nucleotidyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9W6_9ACTO rbh
CCA tRNA nucleotidyltransferase {ECO:0000313|EMBL:EPD73069.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
RNA nucleotidyltransferase
NECEvent2014_2_3_scaffold_99_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10950..11420
DNA (471bp) protein (157aa)
Hydrolase, NUDIX family n=3 Tax=Actinomyces RepID=A7BAU1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73068.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NUDIX hydrolase
NECEvent2014_2_3_scaffold_99_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11407..13839
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZSN9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73067.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13836..16946
DNA (3111bp) protein (1037aa)
Integral membrane protein MviN n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9J8_9ACTO rbh
Integral membrane protein MviN {ECO:0000313|EMBL:EPD73066.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
integral membrane protein MviN
NECEvent2014_2_3_scaffold_99_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16965..18002
DNA (1038bp) protein (346aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" s
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZFB1_9ACTO rbh
NECEvent2014_2_3_scaffold_99_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18143..18430
DNA (288bp) protein (96aa)
UPF0225 protein HMPREF1478_00711 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9W3_9ACTO
UPF0225 protein HMPREF1478_00711 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;
hypothetical protein
NECEvent2014_2_3_scaffold_99_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18451..19092
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8F7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73063.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20446..27303)
DNA (6858bp) protein (2286aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9J3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73061.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_trna_2
unknown

Not on your lists

comp(27698..27770)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_99_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27782..27916)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZFA6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73060.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_99_trna_1
unknown

Not on your lists

comp(27950..28023)
DNA (74bp)
transferRNA
NECEvent2014_2_3_scaffold_99_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28147..29025
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9V6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73059.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29162..30769
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8F2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73058.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_99_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30958..31350)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZSM9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73057.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31478..34102)
DNA (2625bp) protein (875aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.
DNA gyrase subunit A n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9I8_9ACTO rbh
DNA gyrase, A subunit
NECEvent2014_2_3_scaffold_99_22
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34177..36201)
DNA (2025bp) protein (675aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1203556 species="Bacteria; A
gyrBS; DNA topoisomerase (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZFA1_9ACTO rbh
NECEvent2014_2_3_scaffold_99_23
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36504..37535)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9V3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73054.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_24
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37639..38469)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z8E7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73053.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_99_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38462..39658)
DNA (1197bp) protein (399aa)
DNA replication and repair protein RecF n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZSM0_9ACTO rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyce
DNA recombination protein RecF
NECEvent2014_2_3_scaffold_99_26
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39660..40796)
DNA (1137bp) protein (379aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1203556 species="Bacte
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9I3_9ACTO rbh
NECEvent2014_2_3_scaffold_99_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41206..42678)
DNA (1473bp) protein (491aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZF95_9ACTO rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces
chromosomal replication initiator protein DnaA
NECEvent2014_2_3_scaffold_99_28
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


43126..43266
DNA (141bp) protein (47aa)
50S ribosomal protein L34 n=2 Tax=Actinomyces RepID=E6KT14_9ACTO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A
50S ribosomal protein L34
Displaying items 1-30 of 36 in total

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