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NECEvent2014_2_3_scaffold_532

Alias: 172_003_scaffold_532

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_532_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..920
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCD2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74086.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
PDZ/DHR/GLGF domain protein
NECEvent2014_2_3_scaffold_532_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1020..1589)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZID1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74085.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_532_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1691..4705
DNA (3015bp) protein (1005aa)
UPF0182 protein HMPREF1478_00035 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ACZ3_9ACTO rbh
UPF0182 protein HMPREF1478_00035 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;
hypothetical protein
NECEvent2014_2_3_scaffold_532_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4834..5667
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBB9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74083.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
nlpC/P60 family protein
NECEvent2014_2_3_scaffold_532_trna_1
unknown

Not on your lists

5771..5851
DNA (81bp)
transferRNA
NECEvent2014_2_3_scaffold_532_5
unknown

Not on your lists

comp(5959..6666)
DNA (708bp) protein (236aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_532_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6682..8022
DNA (1341bp) protein (447aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZW67_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74317.1}; Flags: Fragment;; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0
hypothetical protein
NECEvent2014_2_3_scaffold_532_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8782..10284
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZJ21_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74315.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
amino acid transporter
NECEvent2014_2_3_scaffold_532_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10400..11032
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADQ0_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74314.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_532_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11263..11613
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZC42_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD74313.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_532_10
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11741..14557)
DNA (2817bp) protein (939aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EHN3_9ACTO rbh
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:EJN46829.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp.
carbohydrate binding family 6
NECEvent2014_2_3_scaffold_532_11
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14974..16554
DNA (1581bp) protein (527aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDN79620.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EDN79620.1};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomyce
Type I restriction-modification system, M subunit n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZJ15_9ACTO rbh
type I restriction-modification system, M subunit
NECEvent2014_2_3_scaffold_532_12
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16551..17813
DNA (1263bp) protein (421aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Actinomyces sp. ICM47 RepID=J1LQ70_9ACTO rbh
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EJG15727.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="
type I restriction-modification system specificity determinant
NECEvent2014_2_3_scaffold_532_13
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18388..19428
DNA (1041bp) protein (347aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EJN46826.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EJN46826.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinom
type i site-specific deoxyribonuclease, hsdr family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5Z2_9ACTO
NECEvent2014_2_3_scaffold_532_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19382..20884
DNA (1503bp) protein (501aa)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZW58_9ACTO
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EPD74307.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces
DEAD/DEAH box helicase
NECEvent2014_2_3_scaffold_532_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20963..21571)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZD01_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74306.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NADPH-quinone reductase (modulator of drug activity B)
NECEvent2014_2_3_scaffold_532_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21585..22256
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZJ11_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74305.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_532_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22431..23735)
DNA (1305bp) protein (435aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1203556 species="Bacteria; Acti
fumC; class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADN9_9ACTO rbh
NECEvent2014_2_3_scaffold_532_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23813..24958)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZC35_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD74303.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
major facilitator transporter
NECEvent2014_2_3_scaffold_532_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25034..25456)
DNA (423bp) protein (141aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;"
Dihydrofolate reductase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZW54_9ACTO
putative dihydrofolate reductase
NECEvent2014_2_3_scaffold_532_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25564..26322)
DNA (759bp) protein (253aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCZ7_9ACTO rbh
thymidylate synthase
NECEvent2014_2_3_scaffold_532_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26727..27056)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADN5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD74299.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_532_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27154..28554
DNA (1401bp) protein (467aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Actinomyces odontolyticus RepID=A7B8R4_9ACTO rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN81743.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actin
signal transduction histidine kinase
Displaying 23 items

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