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NECEvent2014_2_3_scaffold_625

Alias: 172_003_scaffold_625

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_625_1
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteri
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Atopobium sp. ICM58 RepID=J3J7C6_9ACTN
NECEvent2014_2_3_scaffold_625_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95..1447)
DNA (1353bp) protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z710_9ACTO
3-phosphoshikimate 1-carboxyvinyltransferase
NECEvent2014_2_3_scaffold_625_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1444..1971)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCT2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72165.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
DoxX family protein
NECEvent2014_2_3_scaffold_625_4
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2170..2832
DNA (663bp) protein (221aa)
RNA polymerase sigma factor n=1 Tax=Atopobium sp. ICM58 RepID=J3J7C7_9ACTN rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;
RNA polymerase sigma factor RpoE
NECEvent2014_2_3_scaffold_625_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2829..3128
DNA (300bp) protein (100aa)
TIGR02949 family anti-sigma factor n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z5S0_9ACTO
TIGR02949 family anti-sigma factor {ECO:0000313|EMBL:EPD72163.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_6
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3775..4755)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SAL5_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERH28938.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0
NECEvent2014_2_3_scaffold_625_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5278..6150
DNA (873bp) protein (291aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX39_9ACTO rbh
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EWC94689.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
esterase/lipase
NECEvent2014_2_3_scaffold_625_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6811..8100)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCS4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72160.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8179..8856)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z5R6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72158.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8934..9803)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZQ67_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72157.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9840..10565)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z6Z9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72156.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10573..11286)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCR7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72155.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_625_13
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11334..11837)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2Z9F3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJN45290.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
NECEvent2014_2_3_scaffold_625_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11856..12359)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z5R1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72153.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
acyl-CoA thioesterase I
NECEvent2014_2_3_scaffold_625_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12414..15527)
DNA (3114bp) protein (1038aa)
kgd; 2-oxoglutarate decarboxylase (EC:4.1.1.71)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZQ61_9ACTO rbh
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:EPD72152.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sourc
NECEvent2014_2_3_scaffold_625_16
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15497..16138)
DNA (642bp) protein (214aa)
kgd; alpha-ketoglutarate decarboxylase (EC:1.2.4.2)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TX46_9ACTO
Dehydrogenase E1 component {ECO:0000313|EMBL:EWC94683.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NECEvent2014_2_3_scaffold_625_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16458..17201
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z6Y9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72151.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Membrane transporter with CBS domains
Displaying 17 items

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