ggKbase home page

NECEvent2014_2_3_Actinomyces_HPA0247_66_505

NECEvent2014_2_3_Actinomyces_sp__HPA0247_65_476
In projects: NECEvent2014_2_3

Consensus taxonomy: Actinomyces sp. HPA0247  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 101-150 of 258 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_3_scaffold_2315 172_003_scaffold_2315
Species: Actinomyces sp. HPA0247 (100%)
1 1325 bp 69.43 494.83 99.85
NECEvent2014_2_3_scaffold_705 172_003_scaffold_705
Species: Actinomyces sp. HPA0247 (66.67%)
6 5620 bp 67.15 494.23 87.79
NECEvent2014_2_3_scaffold_616 172_003_scaffold_616
Species: Actinomyces sp. HPA0247 (75%)
4 5314 bp 66.22 494.20 73.28
NECEvent2014_2_3_scaffold_361 172_003_scaffold_361
Species: Actinomyces sp. HPA0247 (72.73%)
11 13272 bp 63.86 493.58 87.48
NECEvent2014_2_3_scaffold_450 172_003_scaffold_450
Species: Actinomyces sp. HPA0247 (81.82%)
11 9058 bp 64.57 493.09 96.28
NECEvent2014_2_3_scaffold_1564 172_003_scaffold_1564
Species: Actinomyces sp. ICM47 (100%)
1 1833 bp 63.28 492.80 100.00
NECEvent2014_2_3_scaffold_764 172_003_scaffold_764
Species: Actinomyces sp. HPA0247 (85.71%)
7 5310 bp 63.58 492.68 92.26
NECEvent2014_2_3_scaffold_156 172_003_scaffold_156
Species: Actinomyces sp. HPA0247 (80%)
45 49148 bp 64.98 491.45 81.62
NECEvent2014_2_3_scaffold_532 172_003_scaffold_532
Species: Actinomyces sp. HPA0247 (69.57%)
23 28556 bp 64.07 490.75 86.86
NECEvent2014_2_3_scaffold_806 172_003_scaffold_806
Species: Actinomyces sp. HPA0247 (100%)
4 5191 bp 66.23 490.31 94.26
NECEvent2014_2_3_scaffold_2275 172_003_scaffold_2275
Species: Actinomyces sp. HPA0247 (100%)
2 2709 bp 67.04 490.03 81.95
NECEvent2014_2_3_scaffold_213 172_003_scaffold_213
Species: Actinomyces sp. HPA0247 (78.95%)
19 32479 bp 67.57 489.00 82.03
NECEvent2014_2_3_scaffold_336 172_003_scaffold_336
Species: Actinomyces sp. HPA0247 (81.82%)
22 22496 bp 65.69 488.91 86.88
NECEvent2014_2_3_scaffold_1274 172_003_scaffold_1274
Genus: Actinomyces (100%)
3 2742 bp 71.85 488.68 97.48
NECEvent2014_2_3_scaffold_964 172_003_scaffold_964
Species: Actinomyces sp. HPA0247 (83.33%)
6 4595 bp 64.94 488.42 87.81
NECEvent2014_2_3_scaffold_1046 172_003_scaffold_1046
Species: Actinomyces sp. oral taxon 180 (100%)
1 2628 bp 60.43 488.41 100.00
NECEvent2014_2_3_scaffold_140 172_003_scaffold_140
Species: Actinomyces sp. HPA0247 (96%)
25 36412 bp 68.15 488.06 90.65
NECEvent2014_2_3_scaffold_598 172_003_scaffold_598
Species: Actinomyces sp. HPA0247 (85.71%)
7 6710 bp 67.00 487.40 90.18
NECEvent2014_2_3_scaffold_608 172_003_scaffold_608
Genus: Actinomyces (100%)
8 8308 bp 63.54 487.14 81.57
NECEvent2014_2_3_scaffold_1355 172_003_scaffold_1355
Species: Actinomyces sp. HPA0247 (100%)
3 2732 bp 65.52 487.01 77.09
NECEvent2014_2_3_scaffold_511 172_003_scaffold_511
Species: Actinomyces sp. HPA0247 (100%)
22 23941 bp 67.15 486.28 93.24
NECEvent2014_2_3_scaffold_1841 172_003_scaffold_1841
Species: Actinomyces sp. ICM54 (100%)
1 1596 bp 66.42 485.71 99.81
NECEvent2014_2_3_scaffold_109 172_003_scaffold_109
Species: Actinomyces sp. HPA0247 (87.36%)
87 93065 bp 63.16 485.59 93.05
NECEvent2014_2_3_scaffold_534 172_003_scaffold_534
Species: Actinomyces sp. HPA0247 (100%)
8 9067 bp 66.62 485.32 85.17
NECEvent2014_2_3_scaffold_717 172_003_scaffold_717
Species: Actinomyces sp. HPA0247 (70%)
10 5478 bp 64.26 485.02 80.25
NECEvent2014_2_3_scaffold_1233 172_003_scaffold_1233
Species: Actinomyces sp. HPA0247 (100%)
3 2865 bp 57.80 484.14 80.42
NECEvent2014_2_3_scaffold_1283 172_003_scaffold_1283
Species: Actinomyces sp. HPA0247 (100%)
3 2189 bp 60.90 483.58 89.90
NECEvent2014_2_3_scaffold_1276 172_003_scaffold_1276
Species: Actinomyces sp. HPA0247 (100%)
5 2941 bp 67.26 483.25 92.72
NECEvent2014_2_3_scaffold_1854 172_003_scaffold_1854
Species: Actinomyces sp. HPA0247 (100%)
3 1581 bp 65.84 483.21 90.70
NECEvent2014_2_3_scaffold_402 172_003_scaffold_402
Species: Actinomyces sp. HPA0247 (93.33%)
30 29539 bp 64.69 482.97 92.65
NECEvent2014_2_3_scaffold_369 172_003_scaffold_369
Species: Actinomyces sp. HPA0247 (87.5%)
16 15560 bp 64.18 482.58 89.34
NECEvent2014_2_3_scaffold_1209 172_003_scaffold_1209
Species: Actinomyces sp. HPA0247 (100%)
4 4116 bp 66.55 482.40 87.68
NECEvent2014_2_3_scaffold_929 172_003_scaffold_929
Species: Actinomyces sp. HPA0247 (88.89%)
9 6105 bp 67.27 480.57 89.19
NECEvent2014_2_3_scaffold_1361 172_003_scaffold_1361
Species: Actinomyces sp. HPA0247 (85.71%)
7 6425 bp 62.75 480.14 86.85
NECEvent2014_2_3_scaffold_596 172_003_scaffold_596
Genus: Actinomyces (100%)
11 12557 bp 66.73 479.68 91.69
NECEvent2014_2_3_scaffold_4806 172_003_scaffold_4806
Species: Actinomyces sp. ICM39 (50%)
2 1269 bp 68.64 479.55 100.24
NECEvent2014_2_3_scaffold_482 172_003_scaffold_482
Species: Actinomyces sp. HPA0247 (70%)
10 10029 bp 63.73 478.82 89.35
NECEvent2014_2_3_scaffold_837 172_003_scaffold_837
Species: Actinomyces sp. HPA0247 (100%)
4 3518 bp 64.67 478.27 97.38
NECEvent2014_2_3_scaffold_326 172_003_scaffold_326
Species: Actinomyces sp. HPA0247 (93.75%)
16 17213 bp 65.49 478.06 87.79
NECEvent2014_2_3_scaffold_367 172_003_scaffold_367
Species: Actinomyces sp. HPA0247 (90.91%)
11 12800 bp 65.41 477.77 93.94
NECEvent2014_2_3_scaffold_741 172_003_scaffold_741
Species: Actinomyces sp. HPA0247 (83.33%)
6 4070 bp 62.95 477.75 99.51
NECEvent2014_2_3_scaffold_476 172_003_scaffold_476
Species: Actinomyces sp. HPA0247 (83.33%)
18 18601 bp 64.16 477.20 86.41
NECEvent2014_2_3_scaffold_2375 172_003_scaffold_2375
Species: Actinomyces sp. HPA0247 (50%)
2 1810 bp 65.58 476.44 92.65
NECEvent2014_2_3_scaffold_318 172_003_scaffold_318
Species: Actinomyces sp. HPA0247 (81.25%)
16 17831 bp 64.17 475.56 93.13
NECEvent2014_2_3_scaffold_1913 172_003_scaffold_1913
Species: Actinomyces sp. HPA0247 (66.67%)
3 2813 bp 67.05 473.89 99.50
NECEvent2014_2_3_scaffold_90 172_003_scaffold_90
Species: Actinomyces sp. HPA0247 (82.05%)
39 50509 bp 64.69 473.58 92.22
NECEvent2014_2_3_scaffold_2966 172_003_scaffold_2966
Genus: Actinomyces (66.67%)
3 1636 bp 69.07 473.20 89.85
NECEvent2014_2_3_scaffold_803 172_003_scaffold_803
Species: Actinomyces sp. HPA0247 (80%)
5 6401 bp 66.13 472.94 93.13
NECEvent2014_2_3_scaffold_1048 172_003_scaffold_1048
Species: Actinomyces sp. HPA0247 (50%)
4 4359 bp 65.57 472.88 80.18
NECEvent2014_2_3_scaffold_37 172_003_scaffold_37
Species: Actinomyces sp. HPA0247 (90.29%)
103 106160 bp 63.12 472.69 94.29
Displaying items 101-150 of 258 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.