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NECEvent2014_2_3_scaffold_55

Alias: 172_003_scaffold_55

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_55_1
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)
PF13338 domain protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UQF8_9FIRM
PF13338 domain protein {ECO:0000313|EMBL:ERT61546.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
hypothetical protein
NECEvent2014_2_3_scaffold_55_2
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(758..1894)
DNA (1137bp) protein (379aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EGC81799.1}; EC=2.1.1.- {ECO:0000313|EMBL:EGC81799.1};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphil
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWH7_9FIRM rbh
TrmA family RNA methyltransferase
NECEvent2014_2_3_scaffold_55_3
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1894..3666)
DNA (1773bp) protein (591aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;"
Pyruvate kinase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWH8_9FIRM rbh
pyruvate kinase
NECEvent2014_2_3_scaffold_55_4
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3675..4634)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWH9_9FIRM rbh
NECEvent2014_2_3_scaffold_55_5
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4644..8096)
DNA (3453bp) protein (1151aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaer
DNA polymerase III subunit alpha (EC:2.7.7.7)
Putative DNA polymerase III subunit alpha n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI0_9FIRM rbh
NECEvent2014_2_3_scaffold_55_6
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8106..8894)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI1_9FIRM rbh
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anae
hypothetical protein
NECEvent2014_2_3_scaffold_55_7
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9014..9733)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI2_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGC81859.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii A
protein tyrosine/serine phosphatase
NECEvent2014_2_3_scaffold_55_8
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9727..10575)
DNA (849bp) protein (283aa)
UPF0042 nucleotide-binding protein HMPREF9290_0174 n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI3_9FIRM rbh
Nucleotide-binding protein HMPREF9290_0174 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococ
hypothetical protein
NECEvent2014_2_3_scaffold_55_9
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10575..11477)
DNA (903bp) protein (301aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI4_9FIRM rbh
NECEvent2014_2_3_scaffold_55_10
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11665..11853
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI5_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-
50S ribosomal protein L28
NECEvent2014_2_3_scaffold_55_11
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11935..14061)
DNA (2127bp) protein (709aa)
Catalase {ECO:0000313|EMBL:EGC81844.1}; EC=1.11.1.6 {ECO:0000313|EMBL:EGC81844.1};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Ana
catalase (EC:1.11.1.6)
Catalase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI6_9FIRM rbh
NECEvent2014_2_3_scaffold_55_12
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14135..14800)
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; An
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI7_9FIRM rbh
NECEvent2014_2_3_scaffold_55_13
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14794..15666)
DNA (873bp) protein (291aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepton
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI8_9FIRM rbh
ribosome small subunit-dependent GTPase A
NECEvent2014_2_3_scaffold_55_14
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15648..17627)
DNA (1980bp) protein (660aa)
Putative serine/threonine-protein kinase PrkC n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWI9_9FIRM rbh
Putative serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:EGC81824.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococc
serine/threonine protein kinase with PASTA sensor(s)
NECEvent2014_2_3_scaffold_55_15
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17636..18253)
DNA (618bp) protein (206aa)
Putative serine/threonine phosphatase stp n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ0_9FIRM rbh
Putative serine/threonine phosphatase stp {ECO:0000313|EMBL:EGC81806.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus p
protein serine/threonine phosphatase
NECEvent2014_2_3_scaffold_55_16
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18292..19389)
DNA (1098bp) protein (366aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ1_9FIRM rbh
radical SAM enzyme, Cfr family
NECEvent2014_2_3_scaffold_55_17
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19373..20671)
DNA (1299bp) protein (433aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ2_9FIRM rbh
Fmu (Sun) domain-containing protein
NECEvent2014_2_3_scaffold_55_18
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20671..21603)
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=879305 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ3_9FIRM rbh
methionyl-tRNA formyltransferase
NECEvent2014_2_3_scaffold_55_19
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21603..22070)
DNA (468bp) protein (156aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ4_9FIRM rbh
NECEvent2014_2_3_scaffold_55_20
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22052..25453)
DNA (3402bp) protein (1134aa)
Chromosome partition protein Smc n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ5_9FIRM rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevot
SMC domain-containing protein
NECEvent2014_2_3_scaffold_55_21
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25624..26703)
DNA (1080bp) protein (360aa)
Radical SAM domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ6_9FIRM rbh
Radical SAM domain protein {ECO:0000313|EMBL:EGC81786.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065
radical SAM protein
NECEvent2014_2_3_scaffold_55_22
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26706..27416)
DNA (711bp) protein (237aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ7_9FIRM rbh
NECEvent2014_2_3_scaffold_55_23
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27416..27640)
DNA (225bp) protein (75aa)
Acyl carrier protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ8_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridial
phosphopantetheine-binding protein
NECEvent2014_2_3_scaffold_55_24
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27622..28611)
DNA (990bp) protein (330aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWJ9_9FIRM rbh
fatty acid/phospholipid synthesis protein PlsX
NECEvent2014_2_3_scaffold_55_25
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28660..28839)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK0_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-
50S ribosomal protein L32
NECEvent2014_2_3_scaffold_55_26
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28879..30096)
DNA (1218bp) protein (406aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia;
Acetate kinase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK1_9FIRM rbh
acetate kinase
NECEvent2014_2_3_scaffold_55_27
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30161..30961)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK2_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGC81851.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii A
hypothetical protein
NECEvent2014_2_3_scaffold_55_28
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30943..31467)
DNA (525bp) protein (175aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK3_9FIRM rbh
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EGC81887.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" sou
hypothetical protein
NECEvent2014_2_3_scaffold_55_29
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31469..31798)
DNA (330bp) protein (110aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK4_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EGC81798.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" sou
hypothetical protein
NECEvent2014_2_3_scaffold_55_30
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31773..32222)
DNA (450bp) protein (150aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWK5_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EGC81784.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" sou
methylation site containing protein
Displaying items 1-30 of 64 in total

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