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NECEvent2014_2_3_scaffold_55_59

Organism: NECEvent2014_2_3_Anaerococcus_prevotii_33_80

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(58186..60000)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GWN2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 604.0
  • Bit_score: 1156
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevot similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 604.0
  • Bit_score: 1156
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 604.0
  • Bit_score: 1002
  • Evalue 5.40e-290

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Taxonomy

Anaerococcus prevotii → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1815
ATGACTAGCGATGACAGCAAATTGCTCGATGATGATGTTCTAAAAGAAATAATAGAGGAATTCCAATCGATCAGCGAGTCTCAAGATGGACTAATTACTTATTCGCAGATTTATACATTTGAAAACTTCAAGGAAATGGAAGATGATAGCAAGAAGTTTGTTATAAACCAAGTCCTTAGTTTAGGCATAGAGATTGTAGAAAAATCAGAAACTGTTCTTGAAGATGAAGAAGTAACAGAAGATATGAAAGACGATCTTTCTGATGATGAAGATTTGGAAGAAGAAATAGAAGAAGATGAAGTAGAAGAAGATTTAAATAAAAATGTAGATATCATGGTAGGTGTCAAAGTAGACGACCCTGTAAAGATGTATCTAAAAGAAATTGGAAAAGTTAGTCTACTTACAGCTACAGAAGAGATAATTCTTGCTCGCAAGATGGAAATGGGCGAGATAGCTAGAAAAAAACTCAATGGGGTTAAATTTAATAAACAAAATAAGACTAAACTTGCTAATGACATTTTCTTTGGAGATTTAGCTAATATATTAAAACTTGCTAATGAAGATCTCAAAAACGATGGCAAATTAGATTATAAAACTCAAAAAGAGATTGACGGTCTTTTGAACATGGGCGATTTGTTTAAGCAAATTATGGATCAAGATTTAGACAAAAAGACTCTAGAAGAGTTAAAAACTAAAGTAATGATTTGCAATATTGCAGAAAATTCTGTAAGTGAAGATGATTTAGACAAAAGCAAAGCAAACTCACTATGTGATCTCTTTGATTCATTTGATCATATGTTAAATATCACAGAATCTGATGACATTGTAAATCTTGTTTACTTATCCTTCAATGATATCTTATCAAAAGCTGCAAATAAAGAGCAAATCAAAACAAATGATAGGATGATTTTAAACGATTTTATCGTAACTAGCGAAAGGGCAAGGGCAATTTCTAACAAGATAGAACTAAGCAAAGAAGAATTAGATGAAATTGAAGCGAGTATTGAACTAAGAGATTTGGCTTACAAGATTATTACTGATGATGATTTAAGCGAAGCTGACTATTATGAATTGAAAAAAGCTGTTTTTATTTCTAAAGCGGCTAAGAAAAAGCTTGCTGAGACTAACCTTAGACTTGTAGTTTCAATTGCCAAAAAATATGTTGGTCGTGGCATGAGCTTTTTGGACTTGATTCAAGAAGGAAATATGGGTCTGATGAAAGCTGTTGATAAGTACGACTACAATAGAGGATTTAAGTTTTCAACTTATGCTACTTGGTGGATTAGACAAGCGATAACACGTGCAATCGCAGATCAAGCGAGAACTATAAGAATCCCTGTTCATATGGTTGAAACAATTAATAAACTTGTTAGAATCCAAAGACAACTTGTTCAAGACCTAGGCCGTGACCCATCAAACGAAGAAATTGCGGAACAAATGGGTATTGAGGTAGAAAAGGTGCAAGAGATTAGAAAAATATCTCAAGAACCTGTTTCTTTAGAAACTCCAATAGGTGAAGAAGATGACAGTCACTTAGGAGATTTTATAGAAGATGATACAGCAATTGATCCAGGAGAAGCTGCCAATTATACTATGCTTCGCGAACAATTAAACGATGTTTTATCTTGTCTTGGAGCAAGAGAAAAAAGAGTCCTACAACTTAGATTTGGATTGATAGACGGAACTCCAAGAACTCTAGAAGAAGTAGGGAAAGAATTTGACGTTACAAGAGAGAGAATTAGACAAATTGAGGCTAAGGCCTTGAGAAAGCTAAAATCTCCAAACAAGAGCGAATTATTGAAAGACTTTTTATAA
PROTEIN sequence
Length: 605
MTSDDSKLLDDDVLKEIIEEFQSISESQDGLITYSQIYTFENFKEMEDDSKKFVINQVLSLGIEIVEKSETVLEDEEVTEDMKDDLSDDEDLEEEIEEDEVEEDLNKNVDIMVGVKVDDPVKMYLKEIGKVSLLTATEEIILARKMEMGEIARKKLNGVKFNKQNKTKLANDIFFGDLANILKLANEDLKNDGKLDYKTQKEIDGLLNMGDLFKQIMDQDLDKKTLEELKTKVMICNIAENSVSEDDLDKSKANSLCDLFDSFDHMLNITESDDIVNLVYLSFNDILSKAANKEQIKTNDRMILNDFIVTSERARAISNKIELSKEELDEIEASIELRDLAYKIITDDDLSEADYYELKKAVFISKAAKKKLAETNLRLVVSIAKKYVGRGMSFLDLIQEGNMGLMKAVDKYDYNRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLVQDLGRDPSNEEIAEQMGIEVEKVQEIRKISQEPVSLETPIGEEDDSHLGDFIEDDTAIDPGEAANYTMLREQLNDVLSCLGAREKRVLQLRFGLIDGTPRTLEEVGKEFDVTRERIRQIEAKALRKLKSPNKSELLKDFL*