ggKbase home page

NECEvent2014_2_3_scaffold_9

Alias: 172_003_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 145 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_9_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(202..1416)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Veillonella atypica KON RepID=L1Q1Z7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY21647.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
NECEvent2014_2_3_scaffold_9_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1675..2292
DNA (618bp) protein (206aa)
UPI0003D62AF2 related cluster n=1 Tax=unknown RepID=UPI0003D62AF2 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ17790.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_2_3_scaffold_9_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2400..2777)
DNA (378bp) protein (126aa)
UPI0003D5D8E8 related cluster n=1 Tax=unknown RepID=UPI0003D5D8E8
Uncharacterized protein {ECO:0000313|EMBL:ETJ17791.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
thioesterase superfamily protein
NECEvent2014_2_3_scaffold_9_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2774..3925)
DNA (1152bp) protein (384aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
UPI0003D5F3D0 related cluster n=1 Tax=unknown RepID=UPI0003D5F3D0 rbh
mandelate racemase/muconate lactonizing protein
NECEvent2014_2_3_scaffold_9_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3933..5318)
DNA (1386bp) protein (462aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=546273 speci
O-succinylbenzoate-CoA ligase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSN3_9FIRM rbh
o-succinylbenzoate--CoA ligase
NECEvent2014_2_3_scaffold_9_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5481..6323)
DNA (843bp) protein (281aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=546273 speci
Naphthoate synthase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSN2_9FIRM rbh
naphthoate synthase
NECEvent2014_2_3_scaffold_9_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6328..7188)
DNA (861bp) protein (287aa)
Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01660}; Short=SHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01660};; EC=4.2.99.20 {ECO:0000256|HAMAP-Rule
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSN1_9FIRM rbh
alpha/beta hydrolase fold protein
NECEvent2014_2_3_scaffold_9_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7185..8936)
DNA (1752bp) protein (584aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
UPI0003D697D7 related cluster n=1 Tax=unknown RepID=UPI0003D697D7 rbh
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
NECEvent2014_2_3_scaffold_9_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8976..10118)
DNA (1143bp) protein (381aa)
Isochorismate synthase {ECO:0000313|EMBL:EEP64857.1}; EC=5.4.4.2 {ECO:0000313|EMBL:EEP64857.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonell
Isochorismate synthase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSM9_9FIRM rbh
isochorismate synthase
NECEvent2014_2_3_scaffold_9_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10377..11639)
DNA (1263bp) protein (421aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
UPI0003D61DF7 related cluster n=1 Tax=unknown RepID=UPI0003D61DF7 rbh
phosphoribosylamine--glycine ligase
NECEvent2014_2_3_scaffold_9_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11771..13300)
DNA (1530bp) protein (510aa)
UPI0003D68A3F related cluster n=1 Tax=unknown RepID=UPI0003D68A3F rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
NECEvent2014_2_3_scaffold_9_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13325..13942)
DNA (618bp) protein (206aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
UPI0003D593E3 related cluster n=1 Tax=unknown RepID=UPI0003D593E3 rbh
phosphoribosylglycinamide formyltransferase
NECEvent2014_2_3_scaffold_9_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13935..14996)
DNA (1062bp) protein (354aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
UPI0003D644B5 related cluster n=1 Tax=unknown RepID=UPI0003D644B5 rbh
phosphoribosylformylglycinamidine cyclo-ligase
NECEvent2014_2_3_scaffold_9_14
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14983..16401)
DNA (1419bp) protein (473aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=2 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE11_9FIRM rbh
amidophosphoribosyltransferase
NECEvent2014_2_3_scaffold_9_15
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16411..17139)
DNA (729bp) protein (243aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE12_9FIRM rbh
phosphoribosylaminoimidazolesuccinocarboxamide synthase
NECEvent2014_2_3_scaffold_9_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17206..17697)
DNA (492bp) protein (164aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSM2_9FIRM rbh
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
phosphoribosylaminoimidazole carboxylase catalytic subunit
NECEvent2014_2_3_scaffold_9_17
unknown

Not on your lists

comp(17724..17840)
DNA (117bp) protein (39aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_9_18
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18133..18573)
DNA (441bp) protein (147aa)
UPI0003D66FF9 related cluster n=1 Tax=unknown RepID=UPI0003D66FF9
Uncharacterized protein {ECO:0000313|EMBL:ETJ19463.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_2_3_scaffold_9_19
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18585..19031)
DNA (447bp) protein (149aa)
UPI0003D65608 related cluster n=1 Tax=unknown RepID=UPI0003D65608
Uncharacterized protein {ECO:0000313|EMBL:ETJ19464.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
hypothetical protein
NECEvent2014_2_3_scaffold_9_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19058..19633)
DNA (576bp) protein (192aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FSL9_9FIRM rbh
xanthine phosphoribosyltransferase
NECEvent2014_2_3_scaffold_9_21
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19881..20786)
DNA (906bp) protein (302aa)
UPI0003D62744 related cluster n=1 Tax=unknown RepID=UPI0003D62744 rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ETJ18692.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella s
LysR family transcriptional regulator
NECEvent2014_2_3_scaffold_9_22
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21055..24795
DNA (3741bp) protein (1247aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EFR59763.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EFR59763.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillon
Phosphoribosylformylglycinamidine synthase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE18_9FIRM rbh
phosphoribosylformylglycinamidine synthase
NECEvent2014_2_3_scaffold_9_23
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24958..26193
DNA (1236bp) protein (412aa)
Metallo-beta-lactamase domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE19_9FIRM rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFR60075.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
beta-lactamase
NECEvent2014_2_3_scaffold_9_trna_1
unknown

Not on your lists

26341..26428
DNA (88bp)
transferRNA
NECEvent2014_2_3_scaffold_9_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26627..27652)
DNA (1026bp) protein (342aa)
Homocysteine S-methyltransferase n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FSL5_9FIRM rbh
Homocysteine S-methyltransferase {ECO:0000313|EMBL:EEP64843.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar A
homocysteine S-methyltransferase
NECEvent2014_2_3_scaffold_9_25
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27728..28513)
DNA (786bp) protein (262aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSL4_9FIRM rbh
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEP64842.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="
family 3 extracellular solute-binding protein
NECEvent2014_2_3_scaffold_9_26
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28635..28844
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP64841.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748
NECEvent2014_2_3_scaffold_9_27
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28883..30817)
DNA (1935bp) protein (645aa)
UPI0003D63310 related cluster n=1 Tax=unknown RepID=UPI0003D63310 rbh
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ETJ14938.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
oligopeptide transporter OPT family
NECEvent2014_2_3_scaffold_9_28
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31062..32285
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1403932 spec
UPI0003D697CA related cluster n=1 Tax=unknown RepID=UPI0003D697CA rbh
peptidase T
NECEvent2014_2_3_scaffold_9_29
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32470..33720)
DNA (1251bp) protein (417aa)
UPI0003D61C00 related cluster n=1 Tax=unknown RepID=UPI0003D61C00 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ETJ14936.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
major facilitator superfamily protein
Displaying items 1-30 of 145 in total

View Taxonomy