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NECEvent2014_2_3_scaffold_177

Alias: 172_003_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_177_1
uncultured beta proteobacterium CBNPD1 BAC clone 578, Betaproteobacteria, Proteobacteria, Bacteria

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2..247
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=uncultured beta proteobacterium CBNPD1 BAC clone 578 RepID=B1N6K1_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:ABM53547.1}; TaxID=417305 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium CBN
NECEvent2014_2_3_scaffold_177_trna_9
unknown

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comp(131..203)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_8
unknown

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comp(210..281)
DNA (72bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_7
unknown

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comp(294..366)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_6
unknown

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comp(377..448)
DNA (72bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_5
unknown

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comp(455..527)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_4
unknown

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comp(536..607)
DNA (72bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_3
unknown

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comp(615..687)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_2
unknown

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comp(696..768)
DNA (73bp)
transferRNA
NECEvent2014_2_3_scaffold_177_trna_1
unknown

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comp(777..848)
DNA (72bp)
transferRNA
NECEvent2014_2_3_scaffold_177_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1047..2150)
DNA (1104bp) protein (368aa)
UPI0003D67633 related cluster n=1 Tax=unknown RepID=UPI0003D67633 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ20024.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
NECEvent2014_2_3_scaffold_177_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2147..3184)
DNA (1038bp) protein (346aa)
UPI0003D5DD8D related cluster n=1 Tax=unknown RepID=UPI0003D5DD8D rbh
Nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase {ECO:0000313|EMBL:ETJ20023.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veill
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
NECEvent2014_2_3_scaffold_177_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3375..4262)
DNA (888bp) protein (296aa)
UPI0003D59C91 related cluster n=1 Tax=unknown RepID=UPI0003D59C91 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:ETJ20021.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16
prephenate dehydrogenase
NECEvent2014_2_3_scaffold_177_5
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4364..5710)
DNA (1347bp) protein (449aa)
UPI0003D5FD2C related cluster n=1 Tax=unknown RepID=UPI0003D5FD2C rbh
MATE efflux family protein {ECO:0000313|EMBL:ETJ20020.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_
MATE efflux family protein
NECEvent2014_2_3_scaffold_177_6
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5783..6502)
DNA (720bp) protein (240aa)
UPI0003D67B1E related cluster n=1 Tax=unknown RepID=UPI0003D67B1E rbh
LemA family protein {ECO:0000313|EMBL:ETJ20222.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;
LemA family protein
NECEvent2014_2_3_scaffold_177_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6495..8345)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNG1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP66419.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748
hypothetical protein
NECEvent2014_2_3_scaffold_177_8
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8666..9538)
DNA (873bp) protein (291aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=2 Tax=Veillonella RepID=E1LDY5_9FIRM rbh
Pyruvate/2-ketoisovalerate family 2-oxoacid:acceptor oxidoreductase, beta subunit {ECO:0000313|EMBL:EPD77632.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonell
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
NECEvent2014_2_3_scaffold_177_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9540..11291)
DNA (1752bp) protein (584aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNF9_9FIRM rbh
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EEP66417.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veil
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
NECEvent2014_2_3_scaffold_177_10
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11562..12347)
DNA (786bp) protein (262aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
UPI0003D66318 related cluster n=1 Tax=unknown RepID=UPI0003D66318 rbh
tRNA pseudouridine synthase A
NECEvent2014_2_3_scaffold_177_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12344..13147)
DNA (804bp) protein (268aa)
UPI0003D64E0F related cluster n=1 Tax=unknown RepID=UPI0003D64E0F rbh
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=546273 species="Bacter
cobalt transporter
NECEvent2014_2_3_scaffold_177_12
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13137..13997)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
UPI0003D63623 related cluster n=1 Tax=unknown RepID=UPI0003D63623 rbh
ABC transporter
NECEvent2014_2_3_scaffold_177_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13997..14944)
DNA (948bp) protein (316aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNF5_9FIRM rbh
cobalt ABC transporter ATPase
NECEvent2014_2_3_scaffold_177_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15132..15467)
DNA (336bp) protein (112aa)
50S ribosomal protein L17 n=9 Tax=Veillonella RepID=D1BP35_VEIPT
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_2_3_scaffold_177_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15480..16484)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FNF3_9FIRM rbh
DNA-directed RNA polymerase subunit alpha
NECEvent2014_2_3_scaffold_177_16
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(16556..16945)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=13 Tax=Veillonella RepID=D1BP37_VEIPT
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.
NECEvent2014_2_3_scaffold_177_17
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(16965..17333)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=7 Tax=Veillonella RepID=D1BP38_VEIPT
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.
NECEvent2014_2_3_scaffold_177_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17357..17470)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=13 Tax=Veillonella RepID=D1BP39_VEIPT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_2_3_scaffold_177_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17497..17715)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=8 Tax=Veillonella RepID=D1BP40_VEIPT
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella d
NECEvent2014_2_3_scaffold_177_20
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17739..18509)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQN0_9FIRM rbh
methionine aminopeptidase
NECEvent2014_2_3_scaffold_177_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18513..19076)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE7_9FIRM rbh
adenylate kinase
Displaying items 1-30 of 53 in total

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