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NECEvent2014_2_3_scaffold_34

Alias: 172_003_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_34_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..561)
DNA (561bp) protein (187aa)
NMT1-like family protein n=3 Tax=Clostridium difficile RepID=T2USD9_CLODI rbh
Putative binding protein ytlA {ECO:0000313|EMBL:CCL30094.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
hypothetical protein
NECEvent2014_2_3_scaffold_34_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

947..1681
DNA (735bp) protein (245aa)
Methyltransferase domain protein n=6 Tax=Clostridium difficile RepID=T3GQP5_CLODC rbh
type 11 family methyltransferase
Putative methyltransferase, type 11 family {ECO:0000313|EMBL:CAJ68767.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_34_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1824..2315)
DNA (492bp) protein (164aa)
Prolyl-tRNA editing protein proX n=191 Tax=Clostridium difficile RepID=C9XJC2_CLODC rbh
regulatory protein
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EHJ29594.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_34_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2664..3047
DNA (384bp) protein (128aa)
Uncharacterized protein n=162 Tax=Clostridium difficile RepID=T3GLA1_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG76752.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_34_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3555..3938
DNA (384bp) protein (128aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=Q187K4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ27326.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_34_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3940..4290
DNA (351bp) protein (117aa)
Uncharacterized protein n=156 Tax=Clostridium difficile RepID=Q187K8_CLOD6
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CCL30099.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_34_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4391..4849)
DNA (459bp) protein (153aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3GL70_CLODC rbh
uncharacterised protein
Uncharacterised protein {ECO:0000313|EMBL:CAJ68772.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_34_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4894..5682)
DNA (789bp) protein (263aa)
N-acetylmuramoyl-L-alanine amidase family protein n=140 Tax=Clostridium difficile RepID=C9XJC7_CLODC rbh
phage-related cell wall hydrolase (endolysin)
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EQH99536.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_34_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5821..6258)
DNA (438bp) protein (146aa)
Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=51 Tax=Clostridium difficile RepID=T3GRF5_CLODC rbh
phage-related deoxycytidylate deaminase ( late competence protein)
ComE operon protein 2 family protein {ECO:0000313|EMBL:EHJ29600.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_34_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6492..6695)
DNA (204bp) protein (68aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=C9XJC9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFH07165.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_34_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7080..7589
DNA (510bp) protein (170aa)
Helix-turn-helix family protein n=99 Tax=Clostridium difficile RepID=T3GNW0_CLODC rbh
Transcriptional regulator, Phage-type
Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CAJ68776.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_34_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8099..8530
DNA (432bp) protein (144aa)
Signal peptidase (SPase) II family protein n=46 Tax=Clostridium difficile RepID=T3GMD5_CLODC
putative lipoprotein signal peptidase
Putative lipoprotein signal peptidase {ECO:0000313|EMBL:CEJ98475.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_34_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8964..9764)
DNA (801bp) protein (267aa)
ABC transporter, permease protein n=205 Tax=Clostridium difficile RepID=C9XJD3_CLODC rbh
ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQG76216.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_34_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9881..9970
DNA (90bp) protein (30aa)
Site-specific recombinase, resolvase family n=7 Tax=Clostridium difficile RepID=Q187L8_CLOD6
Site-specific recombinase, resolvase family; TaxID=1215079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T3.;"
site-specific recombinase
NECEvent2014_2_3_scaffold_34_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..11557)
DNA (1599bp) protein (533aa)
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:CAJ68781.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
Site-specific recombinase, resolvase family
NECEvent2014_2_3_scaffold_34_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11885..12061
DNA (177bp) protein (59aa)
Uncharacterized protein n=180 Tax=Clostridium difficile RepID=Q187L7_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22102.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_34_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12235..13365
DNA (1131bp) protein (377aa)
eutG; ethanolamine iron-dependent alcohol dehydrogenase (EC:1.1.1.1)
Ethanolamine iron-dependent Alcohol dehydrogenase {ECO:0000313|EMBL:CAJ68783.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CAJ68783.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepto
Iron-containing alcohol dehydrogenase family protein n=23 Tax=Clostridium difficile RepID=T3GQD4_CLODC rbh
NECEvent2014_2_3_scaffold_34_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13606..13956
DNA (351bp) protein (117aa)
Propanediol utilization protein PduU n=196 Tax=Clostridium difficile RepID=T3GR55_CLODC
eutS; Ethanolamine carboxysome structural protein
Ethanolamine carboxysome structural protein {ECO:0000313|EMBL:CCK94254.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_34_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13964..14398
DNA (435bp) protein (145aa)
Ethanolamine utilization protein, EutP n=6 Tax=Clostridium difficile RepID=T3GNP4_CLODC
eutP; ethanolamine utilization protein
Ethanolamine utilization protein {ECO:0000313|EMBL:CAJ68785.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_34_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14507..15082
DNA (576bp) protein (192aa)
Two-component response regulator n=132 Tax=Clostridium difficile RepID=C9YMM2_CLODR rbh
two-component response regulator
Two-component response regulator, Ethanolamine specific {ECO:0000313|EMBL:CCK90606.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
NECEvent2014_2_3_scaffold_34_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15075..16484
DNA (1410bp) protein (470aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=188 Tax=Clostridium difficile RepID=T3GKZ2_CLODC rbh
eutW; Two-component sensor histidinekinase,Ethanolamine specific
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQH99548.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pep
NECEvent2014_2_3_scaffold_34_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16668..18101
DNA (1434bp) protein (478aa)
Ethanolamine utilization EutA family protein n=6 Tax=Clostridium difficile RepID=T3GQD9_CLODC rbh
eutA; reactivating factor for ethanolamine ammonia lyase
Ethanolamine reactivating factor for ammonialyase eutBC {ECO:0000313|EMBL:CEJ98485.1}; Reactivating factor for ethanolamine ammonia lyase {ECO:0000313|EMBL:CKH16080.1}; TaxID=1496 species="Bacteria; F
NECEvent2014_2_3_scaffold_34_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18119..19483
DNA (1365bp) protein (455aa)
eutB; ethanolamine ammonia lyase large subunit (EC:4.3.1.7)
Ethanolamine ammonia lyase large subunit {ECO:0000313|EMBL:CEJ98486.1}; EC=4.3.1.7 {ECO:0000313|EMBL:CEJ98486.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
Ethanolamine ammonia lyase large subunit family protein n=6 Tax=Clostridium difficile RepID=T3GR60_CLODC rbh
NECEvent2014_2_3_scaffold_34_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19496..20377
DNA (882bp) protein (294aa)
eutC; Ethanolamine ammonia lyase small subunit (EC:4.3.1.7)
Ethanolamine ammonia-lyase light chain {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064958};; Ethanolamine ammo
Ethanolamine ammonia-lyase light chain n=118 Tax=Clostridium difficile RepID=EUTC_CLOD6 rbh
NECEvent2014_2_3_scaffold_34_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20397..21050
DNA (654bp) protein (218aa)
Ethanolamine utilization protein EutL n=193 Tax=Clostridium difficile RepID=T3GM81_CLODC rbh
eutL; ethanolamine utilization protein EutL
Ethanolamine utilization protein EutL {ECO:0000313|EMBL:EQE64538.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_34_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21061..21762
DNA (702bp) protein (234aa)
BMC domain protein n=15 Tax=Clostridium difficile RepID=T3GKZ5_CLODC rbh
eutM; Ethanolamine carboxysome strutural protein
Ethanolamine carboxysome strutural protein {ECO:0000313|EMBL:CEJ98489.1}; Ethanolamine/propanediol utilisation protein {ECO:0000313|EMBL:CKH16170.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_2_3_scaffold_34_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..23234
DNA (1470bp) protein (490aa)
eutE; ethanolamine acetaldehyde oxidoreductase (EC:1.2.1.10)
Ethanolamine acetaldehyde oxydoreductase {ECO:0000313|EMBL:CEJ98490.1}; EC=1.2.1.10 {ECO:0000313|EMBL:CEJ98490.1};; Ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase {ECO:0000313|EMB
Ethanolamine acetaldehyde oxydoreductase n=5 Tax=Clostridium difficile RepID=Q187M7_CLOD6 rbh
NECEvent2014_2_3_scaffold_34_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23320..23607
DNA (288bp) protein (96aa)
BMC domain protein n=179 Tax=Clostridium difficile RepID=C9XJE7_CLODC
eutM; ethanolamine/propanediol utilization protein
BMC domain protein {ECO:0000313|EMBL:EQG75935.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_34_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23734..24495
DNA (762bp) protein (254aa)
eutT; ethanolamine corrinoid cobalamin adenosyltransferase (EC:2.5.1.17)
Ethanolamine corrinoid cobalamin adenosyltransferase {ECO:0000313|EMBL:CAJ68795.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CAJ68795.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
Cobalamin adenosyltransferase family protein n=6 Tax=Clostridium difficile RepID=T3GNQ2_CLODC rbh
NECEvent2014_2_3_scaffold_34_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24508..25137
DNA (630bp) protein (210aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Phosphate propanoyltransferase n=182 Tax=Clostridium difficile RepID=PDUL_CLOD6 rbh
propanediol utilization phosphotransacylase
Displaying items 1-30 of 96 in total

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