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NECEvent2014_2_3_scaffold_43

Alias: 172_003_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_43_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_43_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

236..355
DNA (120bp) protein (40aa)
Putative transposase DNA-binding domain protein n=16 Tax=Clostridium difficile RepID=T2VDF3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE62177.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
putative phage protein
NECEvent2014_2_3_scaffold_43_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

504..758
DNA (255bp) protein (85aa)
Uncharacterized protein n=159 Tax=Clostridium difficile RepID=T3GIB8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62176.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_43_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

785..1117
DNA (333bp) protein (111aa)
Uncharacterized protein n=138 Tax=Clostridium difficile RepID=Q185H3_CLOD6
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH27799.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98913.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_43_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1391..1543
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6BZ38_CLODI
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CAJ69184.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffici
NECEvent2014_2_3_scaffold_43_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1737..2660
DNA (924bp) protein (308aa)
Short C-terminal domain protein n=25 Tax=Clostridium difficile RepID=T3GK08_CLODC rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH27758.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98911.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_43_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3781..4089
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium difficile T15 RepID=U3X872_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22616.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
hypothetical protein
NECEvent2014_2_3_scaffold_43_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4209..4574
DNA (366bp) protein (122aa)
BRO family, N-terminal domain protein n=43 Tax=Clostridium difficile RepID=T3GG93_CLODC
putative phage-related regulatory protein
Putative phage-related regulatory protein {ECO:0000313|EMBL:CCL22615.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_43_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4627..5022
DNA (396bp) protein (132aa)
Uncharacterized protein n=46 Tax=Clostridium difficile RepID=T3GIM0_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62182.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_43_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5074..5235
DNA (162bp) protein (54aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=T3GK18_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62174.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_43_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5563..6027)
DNA (465bp) protein (155aa)
Putative membrane protein n=52 Tax=Clostridium difficile RepID=T3GFL4_CLODC rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:EQH99098.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_43_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6163..6480)
DNA (318bp) protein (106aa)
Uncharacterized protein n=121 Tax=Clostridium difficile RepID=Q185G4_CLOD6
conserved hypothetical protein
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EQE62181.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_43_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6763..7059)
DNA (297bp) protein (99aa)
Uncharacterized protein n=45 Tax=Clostridium difficile RepID=T3GID4_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH27574.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98903.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_43_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7078..7491)
DNA (414bp) protein (138aa)
Putative membrane protein n=2 Tax=Clostridium difficile RepID=T3GKQ7_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ98902.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH27550.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
NECEvent2014_2_3_scaffold_43_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7475..7708)
DNA (234bp) protein (78aa)
Helix-turn-helix family protein n=196 Tax=Clostridium difficile RepID=T3GK23_CLODC
Transcriptional regulator, HTH-type
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22609.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_43_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7927..8301
DNA (375bp) protein (125aa)
Penicillinase repressor family protein n=64 Tax=Clostridium difficile RepID=T3GFL7_CLODC
Transcriptional regulator, beta-lactamsrepressor
Penicillinase repressor family protein {ECO:0000313|EMBL:EQE62175.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_43_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8913..9605
DNA (693bp) protein (231aa)
Transcriptional regulatory family protein n=207 Tax=Clostridium difficile RepID=C9XL82_CLODC rbh
two-component system response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL30512.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_43_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9801..11861
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
His Kinase A domain protein n=92 Tax=Clostridium difficile RepID=T2TD65_CLODI rbh
Two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_43_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12067..12390)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein n=191 Tax=Clostridium difficile RepID=G6BZ23_CLODI
hypothetical protein
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:EQE62425.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_43_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12383..13084)
DNA (702bp) protein (234aa)
AzlC family protein n=187 Tax=Clostridium difficile RepID=C9XL79_CLODC rbh
hypothetical protein
Putative transporter {ECO:0000313|EMBL:CCL30509.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_43_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13362..14747)
DNA (1386bp) protein (462aa)
GntR-family transcriptional regulator n=123 Tax=Clostridium difficile RepID=C9XL78_CLODC rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL30508.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_43_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15193..15615)
DNA (423bp) protein (141aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=C9XL76_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30505.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_43_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15710..15862)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3FIP8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87684.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_43_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16093..18996
DNA (2904bp) protein (968aa)
AAA domain family protein n=36 Tax=Clostridium difficile RepID=T3GIH5_CLODC rbh
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ69167.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
Transcription antiterminator, PTS operonregulator
NECEvent2014_2_3_scaffold_43_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19029..19475
DNA (447bp) protein (149aa)
PTS system, IIbc component n=151 Tax=Clostridium difficile RepID=C9XL74_CLODC
PTS system transporter subunit IIBC
PTS system, fructose/mannitol family IIA component {ECO:0000313|EMBL:CCL22599.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_43_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19598..19900
DNA (303bp) protein (101aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=28 Tax=Clostridium difficile RepID=T3GFR2_CLODC
PTS system fructose/mannitol family transporter subunit IIB
PTS system%2C IIb component {ECO:0000313|EMBL:CKH27215.1}; PTS system, fructose/mannitol family IIBcomponent {ECO:0000313|EMBL:CEJ98890.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostr
NECEvent2014_2_3_scaffold_43_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20081..21487
DNA (1407bp) protein (469aa)
PTS system sugar-specific permease component family protein n=145 Tax=Clostridium difficile RepID=T3GGU0_CLODC rbh
PTS system fructose/mannitol family transporter subunit IIC
PTS system, fructose/mannitol family IIC component {ECO:0000313|EMBL:CCL22597.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_43_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21831..22889
DNA (1059bp) protein (353aa)
sugar-phosphate dehydrogenase (EC:1.1.1.-)
Putative sugar-phosphate dehydrogenase {ECO:0000313|EMBL:CEJ98888.1}; EC=1.1.1.- {ECO:0000313|EMBL:CEJ98888.1};; Sugar dehydrogenase {ECO:0000313|EMBL:CKH27162.1}; EC=1.1.1.14 {ECO:0000313|EMBL:CKH271
Zinc-binding dehydrogenase family protein n=37 Tax=Clostridium difficile RepID=T3GII0_CLODC rbh
NECEvent2014_2_3_scaffold_43_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22988..23674
DNA (687bp) protein (229aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EQE62437.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EQE62437.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
L-ribulose-5-phosphate 4-epimerase n=172 Tax=Clostridium difficile RepID=T3GII6_CLODC rbh
NECEvent2014_2_3_scaffold_43_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23692..24339
DNA (648bp) protein (216aa)
Class II aldolase (EC:4.1.2.17)
Class II aldolase {ECO:0000313|EMBL:CEJ98886.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CEJ98886.1};; Sugar phosphate aldolase {ECO:0000313|EMBL:CKH27105.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CKH27105.1};; TaxID=1
Class II Aldolase and Adducin N-terminal domain protein n=29 Tax=Clostridium difficile RepID=T3GKW3_CLODC rbh
Displaying items 1-30 of 65 in total

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