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NECEvent2014_2_3_scaffold_49

Alias: 172_003_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_49_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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423..797
DNA (375bp) protein (125aa)
Penicillinase repressor family protein n=184 Tax=Clostridium difficile RepID=C9XLH1_CLODC
beta-lactamase repressor
Penicillinase repressor family protein {ECO:0000313|EMBL:EQG76096.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_49_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

802..1938
DNA (1137bp) protein (379aa)
Peptidase, M56 family n=3 Tax=Clostridium difficile RepID=G6BZD2_CLODI rbh
putative beta-lactams signal-transducer
Putative beta-lactams signal-transducer {ECO:0000313|EMBL:CEJ99007.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_49_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1955..2557
DNA (603bp) protein (201aa)
Peptidoglycan-binding/hydrolysing protein {ECO:0000313|EMBL:CKH30683.1}; EC=3.4.17.14 {ECO:0000313|EMBL:CKH30683.1};; Putative peptidoglycan-binding/hydrolysingprotein {ECO:0000313|EMBL:CEJ99006.1}; T
Peptidoglycan binding domain protein n=111 Tax=Clostridium difficile RepID=G6BZD1_CLODI rbh
putative peptidoglycan-binding/hydrolysingprotein
NECEvent2014_2_3_scaffold_49_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2650..3672)
DNA (1023bp) protein (341aa)
Alpha-hydroxy acid dehydrogenase,FMN-dependent n=97 Tax=Clostridium difficile RepID=Q181X1_CLOD6 rbh
alpha-hydroxy acid dehydrogenase
Alpha-hydroxy acid dehydrogenase,FMN-dependent {ECO:0000313|EMBL:CAJ69272.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
NECEvent2014_2_3_scaffold_49_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4001..4183)
DNA (183bp) protein (61aa)
Uncharacterized protein n=184 Tax=Clostridium difficile RepID=T3GJ59_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61460.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4496..4915
DNA (420bp) protein (140aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=C9XLG5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQI81148.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5046..6887
DNA (1842bp) protein (614aa)
Diguanylate cyclase domain protein n=160 Tax=Clostridium difficile RepID=G6BZC7_CLODI rbh
Putative diguanylate cyclase signaling protein {ECO:0000313|EMBL:CCL22715.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=
putative diguanylate cyclase signaling protein
NECEvent2014_2_3_scaffold_49_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6971..8800
DNA (1830bp) protein (610aa)
Diguanylate cyclase domain protein n=25 Tax=Clostridium difficile RepID=T2TXS5_CLODI rbh
putative diguanylate cyclase signaling protein
Putative diguanylate cyclase signaling protein {ECO:0000313|EMBL:CEJ99001.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_49_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8817..10808
DNA (1992bp) protein (664aa)
Sensory box protein n=116 Tax=Clostridium difficile RepID=T3GFU7_CLODC rbh
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CCL22712.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
Transcriptional regulator, sigma-54-dependent
NECEvent2014_2_3_scaffold_49_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11070..12329
DNA (1260bp) protein (420aa)
Aminotransferase class I and II n=131 Tax=Clostridium difficile RepID=T3GJB3_CLODC rbh
putative pyridoxal phosphate-dependenttransferase
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CAJ69267.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_49_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12390..14177
DNA (1788bp) protein (596aa)
iorA; indole pyruvate ferredoxin/flavodoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoredu
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=182 Tax=Clostridium difficile RepID=T3GEY3_CLODC rbh
NECEvent2014_2_3_scaffold_49_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14179..14754
DNA (576bp) protein (192aa)
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8)
Indole pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:CCL30615.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CCL30615.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
Indole pyruvate ferredoxin/flavodoxin oxidoreductase n=214 Tax=Clostridium difficile RepID=Q181W6_CLOD6 rbh
NECEvent2014_2_3_scaffold_49_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14807..15877
DNA (1071bp) protein (357aa)
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:00002
Probable butyrate kinase n=174 Tax=Clostridium difficile RepID=C9XLF8_CLODC rbh
NECEvent2014_2_3_scaffold_49_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16095..16796
DNA (702bp) protein (234aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=T3GJU7_CLODC rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL22707.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_49_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16856..17362
DNA (507bp) protein (169aa)
NUDIX domain protein n=170 Tax=Clostridium difficile RepID=T3GJA8_CLODC rbh
NUDIX family hydrolase
NUDIX domain protein {ECO:0000313|EMBL:EQE61469.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_49_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17537..18559
DNA (1023bp) protein (341aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=G6BCN1_CLODI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61420.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18706..19014)
DNA (309bp) protein (103aa)
Uncharacterized protein n=216 Tax=Clostridium difficile RepID=C9XLF4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30610.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19074..19502)
DNA (429bp) protein (143aa)
Uncharacterized protein n=153 Tax=Clostridium difficile RepID=C9XLF3_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ25191.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_49_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19725..21224)
DNA (1500bp) protein (500aa)
Carbon starvation protein CstA n=10 Tax=Clostridium difficile RepID=G6BCM8_CLODI rbh
carbon starvation protein
Putative CstA-like carbon starvation protein {ECO:0000313|EMBL:CCL22701.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_49_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21600..22514
DNA (915bp) protein (305aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
Quinolinate synthase A n=190 Tax=Clostridium difficile RepID=NADA_CLOD6 rbh
nadA; quinolinate synthetase
NECEvent2014_2_3_scaffold_49_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22527..23828
DNA (1302bp) protein (434aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=207 Tax=Clostridium difficile RepID=C9XLF0_CLODC rbh
FAD binding domain protein {ECO:0000313|EMBL:EHJ25188.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_49_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23809..24645
DNA (837bp) protein (279aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=48 Tax=Clostridium difficile RepID=C9XLE9_CLODC rbh
nadC; nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CBE05436.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_49_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24901..25233
DNA (333bp) protein (111aa)
DsrE/DsrF-like family protein n=212 Tax=Clostridium difficile RepID=C9XLE8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30604.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25395..25580
DNA (186bp) protein (62aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=C9XLE7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61424.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25607..26692
DNA (1086bp) protein (362aa)
ABC-type transport system, multidrug-family permease n=129 Tax=Clostridium difficile RepID=Q185N7_CLOD6 rbh
ABC-type transport system, multidrug-familypermease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CDT12738.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ98984.1}; Permease {ECO:0000313|EMBL:CKH299
NECEvent2014_2_3_scaffold_49_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26685..27143
DNA (459bp) protein (153aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=Q185N8_CLOD6 rbh
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBE05430.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_49_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27178..28269
DNA (1092bp) protein (364aa)
NMT1-like family protein n=181 Tax=Clostridium difficile RepID=T3GJE7_CLODC rbh
ABC-type transportsystem,nitrate/sulfonate/taurine extracellularsolute-binding protein
ABC-type transport system,nitrate/sulfonate/taurine extracellular solute-binding protein {ECO:0000313|EMBL:CCL22693.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
NECEvent2014_2_3_scaffold_49_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28274..28498
DNA (225bp) protein (75aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=T3GF18_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22692.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28508..29071
DNA (564bp) protein (188aa)
Uncharacterized protein n=96 Tax=Clostridium difficile RepID=T3GG14_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE61468.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_49_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29032..29661
DNA (630bp) protein (210aa)
Aliphatic sulfonates transport permease protein SsuC family protein n=207 Tax=Clostridium difficile RepID=G6BCL7_CLODI rbh
ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE61461.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
Displaying items 1-30 of 65 in total

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