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NECEvent2014_2_3_scaffold_67

Alias: 172_003_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_67_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(416..1891)
DNA (1476bp) protein (492aa)
Putative CDP-glycerol:Poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Clostridium difficile CD002 RepID=U3VTF9_CLODI rbh
putative CDP-glycerol:Poly(glycerophosphate)glycerophosphotransfera se
Putative CDP-glycerol:Poly(Glycerophosphate)glycerophosphotransfera se {ECO:0000313|EMBL:CEJ96756.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
NECEvent2014_2_3_scaffold_67_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1929..2669)
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=8 Tax=Clostridium difficile RepID=T3IIV4_CLODC rbh
flagella glycosylation methyltransferase domainprotein
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:CKH77314.1}; Flagella glycosylation methyltransferase domainprotein {ECO:0000313|EMBL
NECEvent2014_2_3_scaffold_67_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2682..3326)
DNA (645bp) protein (215aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=T3IKG9_CLODC rbh
putative nucleoside triphosphate transferase
LicC protein {ECO:0000313|EMBL:CKH77337.1}; Putative nucleoside triphosphate transferase {ECO:0000313|EMBL:CEJ96754.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
NECEvent2014_2_3_scaffold_67_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3299..3901)
DNA (603bp) protein (201aa)
flagella glycosylation phosphoserinephosphatase (EC:3.1.3.3)
Flagella glycosylation phosphoserinephosphatase {ECO:0000313|EMBL:CEJ96753.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CEJ96753.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostre
HAD phosphoserine phosphatase-like hydrolase, IB family protein n=26 Tax=Clostridium difficile RepID=T3INT8_CLODC rbh
NECEvent2014_2_3_scaffold_67_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4618..6759)
DNA (2142bp) protein (714aa)
Glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase {ECO:0000313|EMBL:CEJ96752.1}; EC=2.4.1.- {ECO:0000313|EMBL:CEJ96752.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
Glycosyl transferase 2 family protein n=10 Tax=Clostridium difficile RepID=T3IKM2_CLODC rbh
NECEvent2014_2_3_scaffold_67_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6853..7725)
DNA (873bp) protein (291aa)
Flagellin n=22 Tax=Clostridium difficile RepID=T3INY6_CLODC rbh
fliC; Flagellin C
Flagellin C {ECO:0000313|EMBL:CEJ96751.1}; Flagellin subunit {ECO:0000313|EMBL:CKH77424.1}; Flagellin subunit FliC {ECO:0000313|EMBL:AAF09167.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia;
NECEvent2014_2_3_scaffold_67_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7826..8161)
DNA (336bp) protein (112aa)
Flagellar FliT family protein n=6 Tax=Clostridium difficile RepID=T3IMP4_CLODC
conserved hypothetical protein
Flagellar protein FliT {ECO:0000313|EMBL:CKH77465.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ96750.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
NECEvent2014_2_3_scaffold_67_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8164..9687)
DNA (1524bp) protein (508aa)
Flagellar hook-associated family protein n=16 Tax=Clostridium difficile RepID=T3IHM1_CLODC rbh
fliD; Flagellar hook-associated protein 2 FliD (orHAP2)
Flagellar cap protein {ECO:0000313|EMBL:CKH77487.1}; Flagellar cap protein FliD {ECO:0000313|EMBL:AAK18787.1}; Flagellar hook-associated protein 2 FliD (OrHAP2) {ECO:0000313|EMBL:CEJ96749.1}; TaxID=14
NECEvent2014_2_3_scaffold_67_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9715..10068)
DNA (354bp) protein (118aa)
Flagellar protein FliS2 n=18 Tax=Clostridium difficile RepID=Q18CX1_CLOD6
fliS2; Flagellar protein FliS2
Flagellar protein {ECO:0000313|EMBL:CKH77517.1}; Flagellar protein FliS2 {ECO:0000313|EMBL:CEJ96748.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pept
NECEvent2014_2_3_scaffold_67_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10065..10460)
DNA (396bp) protein (132aa)
Flagellar protein FliS n=18 Tax=Clostridium difficile RepID=T3IKL7_CLODC
fliS1; Flagellar protein FliS1
Flagellar protein FliS1 {ECO:0000313|EMBL:CAJ67056.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_67_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10482..10694)
DNA (213bp) protein (71aa)
Carbon storage regulator homolog n=25 Tax=Clostridium difficile RepID=CSRA_CLOD6
csrA; Carbon storage regulator homolog CsrA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
NECEvent2014_2_3_scaffold_67_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10688..11080)
DNA (393bp) protein (131aa)
Flagellar assembly factor FliW n=18 Tax=Clostridium difficile RepID=FLIW_CLOD6
fliW; Flagellar assembly factor FliW
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_67_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11096..12028)
DNA (933bp) protein (311aa)
Flagellar hook-associated protein 3 n=18 Tax=Clostridium difficile RepID=T3IHL7_CLODC rbh
flgL; Flagellar hook-associated protein FlgL (orHAP3)
Flagellar hook-associated protein {ECO:0000313|EMBL:CKH77694.1}; Flagellar hook-associated protein FlgL (OrHAP3) {ECO:0000313|EMBL:CEJ96744.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Cl
NECEvent2014_2_3_scaffold_67_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12047..13357)
DNA (1311bp) protein (437aa)
Flagellar hook-associated protein FlgK n=15 Tax=Clostridium difficile RepID=T3IIZ8_CLODC rbh
flgK; Flagellar hook-associated protein FlgK (orHAP1)
Flagellar hook-associated protein FlgK (OrHAP1) {ECO:0000313|EMBL:CEJ96743.1}; Putative flagellar hook-associated protein {ECO:0000313|EMBL:CKH77732.1}; TaxID=1496 species="Bacteria; Firmicutes; Clost
NECEvent2014_2_3_scaffold_67_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13375..13791)
DNA (417bp) protein (139aa)
FlgN family protein n=18 Tax=Clostridium difficile RepID=T3IKL2_CLODC
putative flagellar biosynthesis protein
Putative flagellar biosynthesis protein {ECO:0000313|EMBL:CAJ67051.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_67_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13796..14071)
DNA (276bp) protein (92aa)
Flagellar biosynthesis anti-sigma factor FlgM n=18 Tax=Clostridium difficile RepID=T3INX6_CLODC
flgM; Negative regulator of flagellin synthesis(Anti-sigma-d factor)
Negative regulator of flagellin synthesis {ECO:0000313|EMBL:CKH77811.1}; Negative regulator of flagellin synthesis(Anti-sigma-d factor) {ECO:0000313|EMBL:CEJ96741.1}; TaxID=1496 species="Bacteria; Fir
NECEvent2014_2_3_scaffold_67_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14222..14536)
DNA (315bp) protein (105aa)
Surface presentation of antigens family protein n=15 Tax=Clostridium difficile RepID=T3IMN2_CLODC
fliN; Flagellar motor switch protein FliN
Flagellar motor switch protein {ECO:0000313|EMBL:CKH77839.1}; Flagellar motor switch protein FliN {ECO:0000313|EMBL:CEJ96740.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
NECEvent2014_2_3_scaffold_67_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14560..14988)
DNA (429bp) protein (143aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3IHL2_CLODC
intron RNA domain IV
Protein of uncharacterised function (DUF327) {ECO:0000313|EMBL:CKH77880.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ96739.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_2_3_scaffold_67_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14997..15665)
DNA (669bp) protein (223aa)
Transglycosylase SLT domain protein n=24 Tax=Clostridium difficile RepID=T3IIZ3_CLODC rbh
putative lytic transglycosylase
Putative lytic transglycosylase {ECO:0000313|EMBL:CAJ67047.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_67_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16111..19917)
DNA (3807bp) protein (1269aa)
purL; Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Formylglycinamidine ribonucleotide synthetase {ECO:0000313|EMBL:CKH77951.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CKH77951.1};; Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CEJ96737.1}; EC=6.3
Phosphoribosylformylglycinamidine synthase n=6 Tax=Clostridium difficile RepID=T3IMQ7_CLODC rbh
NECEvent2014_2_3_scaffold_67_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19942..21192)
DNA (1251bp) protein (417aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000313|EMBL:CAJ67045.1}; EC=6.3.4.13 {ECO:0000313|EMBL:CAJ67045.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcac
Phosphoribosylamine--glycine ligase n=136 Tax=Clostridium difficile RepID=T3IHN0_CLODC rbh
NECEvent2014_2_3_scaffold_67_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21203..22735)
DNA (1533bp) protein (511aa)
purH; Bifunctional purine biosynthesis protein purH[Includes: Phosphoribosylaminoimidazolecarboxamideformyltransferase ; IMP cyclohydrolase] (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=120 Tax=Clostridium difficile RepID=PUR9_CLOD6 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
NECEvent2014_2_3_scaffold_67_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22728..23321)
DNA (594bp) protein (198aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=145 Tax=Clostridium difficile RepID=C9XIZ1_CLODC rbh
phosphoribosylglycinamide formyltransferase
NECEvent2014_2_3_scaffold_67_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23315..24391)
DNA (1077bp) protein (359aa)
purG; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=59 Tax=Clostridium difficile RepID=T3INZ1_CLODC rbh
NECEvent2014_2_3_scaffold_67_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24385..25752)
DNA (1368bp) protein (456aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=210 Tax=Clostridium difficile RepID=C9XIY9_CLODC rbh
amidophosphoribosyltransferase
NECEvent2014_2_3_scaffold_67_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25764..26462)
DNA (699bp) protein (233aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=216 Tax=Clostridium difficile RepID=C9XIY8_CLODC rbh
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase
NECEvent2014_2_3_scaffold_67_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26468..26944)
DNA (477bp) protein (159aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=187 Tax=Clostridium difficile RepID=C9XIY7_CLODC rbh
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
NECEvent2014_2_3_scaffold_67_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27394..27906
DNA (513bp) protein (171aa)
Nitroreductase family protein n=6 Tax=Clostridium difficile RepID=T3IMR8_CLODC rbh
putative nitroreductase
Putative nitroreductase {ECO:0000313|EMBL:CAJ67038.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_67_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28161..29324)
DNA (1164bp) protein (388aa)
Transposase, IS605 OrfB family n=136 Tax=Clostridium difficile RepID=T3IHP0_CLODC rbh
Transposase IS200/IS605-like OrfB
Transposase IS200/IS605-like OrfB {ECO:0000313|EMBL:CAJ67037.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_67_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29321..29719)
DNA (399bp) protein (133aa)
Transposase IS200 like family protein n=165 Tax=Clostridium difficile RepID=T3IJ23_CLODC
transposase IS200/IS605-like OrfA
Transposase IS200/IS605-like OrfA {ECO:0000313|EMBL:CAJ67036.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
Displaying items 1-30 of 55 in total

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