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NECEvent2014_2_3_scaffold_71

Alias: 172_003_scaffold_71

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_71_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27934..28149
DNA (216bp) protein (72aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=214 Tax=Clostridium difficile RepID=C9XNT1_CLODC
exodeoxyribonuclease VII small subunit
NECEvent2014_2_3_scaffold_71_32
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28152..29039
DNA (888bp) protein (296aa)
ispA; Geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase {ECO:0000313|EMBL:CCL21313.1}; EC=2.5.1.10 {ECO:0000313|EMBL:CCL21313.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
Geranyltranstransferase n=174 Tax=Clostridium difficile RepID=C9XNT2_CLODC rbh
NECEvent2014_2_3_scaffold_71_33
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29069..29506
DNA (438bp) protein (146aa)
Divergent PAP2 family protein n=206 Tax=Clostridium difficile RepID=G6B7U9_CLODI
hypothetical protein
Divergent PAP2 family protein {ECO:0000313|EMBL:EQG77599.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_71_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29540..31405
DNA (1866bp) protein (622aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=7 Tax=Clostridium difficile RepID=DXS_CLOD6 rbh
NECEvent2014_2_3_scaffold_71_35
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31538..32350
DNA (813bp) protein (271aa)
Ribosomal RNA large subunit methyltransferase J n=178 Tax=Clostridium difficile RepID=G6BW35_CLODI rbh
putative RNA-binding S4-domain protein
Hemolysin TlyA family protein {ECO:0000313|EMBL:EQI87104.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_71_36
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32370..34049
DNA (1680bp) protein (560aa)
DNA repair protein RecN n=73 Tax=Clostridium difficile RepID=Q18B72_CLOD6 rbh
recN; DNA repair protein RecN (Recombination proteinN)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
NECEvent2014_2_3_scaffold_71_37
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34263..35129
DNA (867bp) protein (289aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=T3HY85_CLODC rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG97110.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97781.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_71_38
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35222..35713)
DNA (492bp) protein (164aa)
Putative N-acetyltransferase {ECO:0000313|EMBL:CDS86399.1}; Uncharacterized N-acetyltransferase C1271.07c {ECO:0000313|EMBL:CDS85949.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDS85949.1};; TaxID=1496 species="
Acetyltransferase family protein n=183 Tax=Clostridium difficile RepID=T3HVC8_CLODC rbh
putative N-acetyltransferase
NECEvent2014_2_3_scaffold_71_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35774..36232)
DNA (459bp) protein (153aa)
Spermine/spermidine acetyltransferase n=5 Tax=Clostridium difficile RepID=T2YFL8_CLODI rbh
Putative diamine N-acetyltransferase {ECO:0000313|EMBL:EHJ26122.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
bltD; spermine/spermidine acetyltransferase
NECEvent2014_2_3_scaffold_71_40
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36375..37433
DNA (1059bp) protein (353aa)
spoIVB; Stage IV sporulation protein B, peptidase S55family (EC:3.4.21.116)
Stage IV sporulation protein B {ECO:0000313|EMBL:CKG97194.1}; EC=3.4.21.116 {ECO:0000313|EMBL:CKG97194.1};; Stage IV sporulation protein B, peptidase S55 family {ECO:0000313|EMBL:CDT47668.1}; EC=3.4.2
PDZ domain protein n=124 Tax=Clostridium difficile RepID=T3HSC5_CLODC rbh
NECEvent2014_2_3_scaffold_71_41
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37575..38399
DNA (825bp) protein (275aa)
Stage 0 sporulation protein A n=122 Tax=Clostridium difficile RepID=C9XNU1_CLODC rbh
spo0A; stage 0 sporulation protein A
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_71_42
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38812..39933
DNA (1122bp) protein (374aa)
Thiamin pyrophosphokinase, catalytic domain protein n=212 Tax=Clostridium difficile RepID=T2TM71_CLODI rbh
pyrophosphokinase
Thiamin pyrophosphokinase, catalytic domain protein {ECO:0000313|EMBL:EQI87111.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_71_43
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39951..40826
DNA (876bp) protein (292aa)
Uncharacterized protein n=78 Tax=Clostridium difficile RepID=T3HVD3_CLODC rbh
conserved hypothetical protein
Protein of uncharacterised function (DUF3186) {ECO:0000313|EMBL:CKG97325.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS85960.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_2_3_scaffold_71_44
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40850..41542
DNA (693bp) protein (231aa)
Glycosyl transferase 2 family protein n=187 Tax=Clostridium difficile RepID=C9XNU4_CLODC rbh
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:CBE03314.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_71_45
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41550..42374
DNA (825bp) protein (275aa)
Glycosyl transferase 4 family protein n=172 Tax=Clostridium difficile RepID=C9XNU5_CLODC rbh
glycosyltransferase
Glycosyl transferase 4 family protein {ECO:0000313|EMBL:EQE67514.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_71_46
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42379..43446
DNA (1068bp) protein (356aa)
Uncharacterized protein n=112 Tax=Clostridium difficile RepID=T3HX75_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68073.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_71_47
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43448..43984
DNA (537bp) protein (179aa)
Putative hydrolase, NUDIX family {ECO:0000313|EMBL:CCL29298.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CCL29298.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcacea
ADP-ribose pyrophosphatase n=211 Tax=Clostridium difficile RepID=C9XNU7_CLODC rbh
ADP-ribose pyrophosphatase
NECEvent2014_2_3_scaffold_71_48
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44124..44657
DNA (534bp) protein (178aa)
Uncharacterized protein n=126 Tax=Clostridium difficile RepID=T2U2N5_CLODI rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL21329.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_71_49
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44669..45583
DNA (915bp) protein (305aa)
Phage integrase family protein n=151 Tax=Clostridium difficile RepID=C9XNU9_CLODC rbh
tyrosine recombinase
Phage integrase, SAM-like domain protein {ECO:0000313|EMBL:EHJ30566.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_3_scaffold_71_50
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45625..46797
DNA (1173bp) protein (391aa)
drm; Phosphopentomutase (Phosphodeoxyribomutase) (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
Phosphopentomutase n=39 Tax=Clostridium difficile RepID=DEOB_CLOD6 rbh
NECEvent2014_2_3_scaffold_71_51
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46844..47656
DNA (813bp) protein (271aa)
pupG; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1496 species="Bacte
Purine nucleoside phosphorylase n=5 Tax=Clostridium difficile RepID=T3HV78_CLODC rbh
NECEvent2014_2_3_scaffold_71_52
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47860..49185
DNA (1326bp) protein (442aa)
pdp; Pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CEJ97796.1}; EC=2.4.2.2 {ECO:0000313|EMBL:CEJ97796.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
Pyrimidine-nucleoside phosphorylase n=168 Tax=Clostridium difficile RepID=Q18B84_CLOD6 rbh
NECEvent2014_2_3_scaffold_71_53
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49398..50477
DNA (1080bp) protein (360aa)
YceG family protein n=141 Tax=Clostridium difficile RepID=G6BW53_CLODI rbh
aminodeoxychorismate lyase
Putative aminodeoxychorismate lyase {ECO:0000313|EMBL:CAJ68080.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_71_54
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50649..51323
DNA (675bp) protein (225aa)
putative O-methyltransferase (EC:2.1.1.-)
Mycolic acid cyclopropane synthetase family protein n=177 Tax=Clostridium difficile RepID=T3HWG2_CLODC rbh
Mycolic acid cyclopropane synthetase family protein {ECO:0000313|EMBL:EQG77646.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_71_55
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51310..52557
DNA (1248bp) protein (416aa)
Peptidase U32 family protein n=172 Tax=Clostridium difficile RepID=T3HXD8_CLODC rbh
putative peptidase, U32 family
Putative peptidase, U32 family {ECO:0000313|EMBL:CAJ68082.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_71_56
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52629..54293
DNA (1665bp) protein (555aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Putative peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CAJ68083.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CAJ68083.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep
Penicillin binding transpeptidase domain protein n=101 Tax=Clostridium difficile RepID=C9XNV6_CLODC rbh
NECEvent2014_2_3_scaffold_71_57
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54390..54674)
DNA (285bp) protein (95aa)
RNA polymerase sigma factor n=141 Tax=Clostridium difficile RepID=T3HSU8_CLODC
FliA/WhiG family RNA polymerase sigma 28 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_71_58
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54697..56214)
DNA (1518bp) protein (506aa)
Resolvase, N terminal domain protein n=35 Tax=Clostridium difficile RepID=T3HRJ0_CLODC rbh
putative site-specific recombinase
Putative site-specific recombinase {ECO:0000313|EMBL:CDS85992.1}; Site-specific recombinase {ECO:0000313|EMBL:CKG97810.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
NECEvent2014_2_3_scaffold_71_59
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56339..57160)
DNA (822bp) protein (274aa)
TPR repeat family protein n=90 Tax=Clostridium difficile RepID=T3HWG6_CLODC rbh
lipoprotein
TPR repeat family protein {ECO:0000313|EMBL:EQE67511.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_71_60
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57351..57926
DNA (576bp) protein (192aa)
Cell surface protein {ECO:0000313|EMBL:CKG97863.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CKG97863.1};; Cwp26 {ECO:0000313|EMBL:AFV73908.1}; Putative cell surface protein cwp26 {ECO:0000313|EMBL:CEJ97804.1};
Cwp26 n=28 Tax=Clostridium difficile RepID=L7PGY0_CLODI
cwp26; putative cell surface protein cwp26
Displaying items 31-60 of 60 in total

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