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NECEvent2014_2_3_scaffold_108

Alias: 172_003_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_108_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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72..1262
DNA (1191bp) protein (397aa)
putative peptidase, M20D family (EC:3.5.1.-)
Amidohydrolase n=160 Tax=Clostridium difficile RepID=G6BTA7_CLODI rbh
Uncharacterized protein {ECO:0000313|EMBL:EQE60161.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_108_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1353..2855
DNA (1503bp) protein (501aa)
Aminobenzoyl-glutamate transport protein n=197 Tax=Clostridium difficile RepID=Q183S2_CLOD6 rbh
abgT; aminobenzoyl-glutamate transport protein
AbgT transporter family protein {ECO:0000313|EMBL:EHJ33260.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_108_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2927..4183
DNA (1257bp) protein (419aa)
Serine hydroxymethyltransferase n=146 Tax=Clostridium difficile RepID=C9XPE1_CLODC rbh
serine hydroxymethyltransferase
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBE06275.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
NECEvent2014_2_3_scaffold_108_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4355..7129
DNA (2775bp) protein (925aa)
calcium-transporting ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EQE60163.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EQE60163.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost
Calcium-translocating P-type ATPase, PMCA-type n=77 Tax=Clostridium difficile RepID=T2TFC0_CLODI rbh
NECEvent2014_2_3_scaffold_108_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7254..7379)
DNA (126bp) protein (42aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2TE83_CLODI
YbaK/prolyl-tRNA synthetase associated domain-containing protein {ECO:0000313|EMBL:CKH88666.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
YbaK/prolyl-tRNA synthetase associated domain-containing protein
NECEvent2014_2_3_scaffold_108_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7754..8932
DNA (1179bp) protein (393aa)
Cation diffusion facilitator transporter family protein n=173 Tax=Clostridium difficile RepID=T3G8A0_CLODC rbh
cation efflux protein
Putative cation efflux protein {ECO:0000313|EMBL:CCL23206.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_108_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9262..12180
DNA (2919bp) protein (973aa)
Conserved repeat domain protein n=3 Tax=Clostridium difficile RepID=T3GCN7_CLODC rbh
Putative adhesin {ECO:0000313|EMBL:CAJ69719.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (st
putative adhesin
NECEvent2014_2_3_scaffold_108_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12551..13213
DNA (663bp) protein (221aa)
Anthrax toxin lethal factor, N-and C-terminal domain protein n=98 Tax=Clostridium difficile RepID=T3G8A4_CLODC rbh
secreted metalloprotease
Uncharacterized protein {ECO:0000313|EMBL:CCL23203.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_108_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13335..14297)
DNA (963bp) protein (321aa)
EamA-like transporter family protein n=32 Tax=Clostridium difficile RepID=T3G9F1_CLODC rbh
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69717.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_108_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14467..15657)
DNA (1191bp) protein (397aa)
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CCL31128.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CCL31128.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Aminotransferase class-V family protein n=183 Tax=Clostridium difficile RepID=C9XPD5_CLODC rbh
aspartate aminotransferase
NECEvent2014_2_3_scaffold_108_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15963..16409
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=99 Tax=Clostridium difficile RepID=Q183R5_CLOD6 rbh
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCL31127.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_108_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16411..17505
DNA (1095bp) protein (365aa)
Oxidoreductase (FAD-binding domain) {ECO:0000313|EMBL:CKH88389.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH88389.1};; Putative oxidoreductase (Fad-binding domain) {ECO:0000313|EMBL:CEJ99456.1}; TaxID=1496 spe
Flavin oxidoreductase / NADH oxidase family protein n=6 Tax=Clostridium difficile RepID=T3GB66_CLODC rbh
putative oxidoreductase (fad-binding domain)
NECEvent2014_2_3_scaffold_108_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17581..18111
DNA (531bp) protein (177aa)
Flavodoxin domain protein n=60 Tax=Clostridium difficile RepID=T3GDM2_CLODC rbh
putative flavodoxin
Putative flavodoxin {ECO:0000313|EMBL:CAJ69713.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_108_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18462..18797
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI000369114E
Putative membrane protein {ECO:0000313|EMBL:CCL23197.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
hypothetical protein
NECEvent2014_2_3_scaffold_108_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19047..20423)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=83 Tax=Clostridium difficile RepID=T3GB80_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69711.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_108_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20691..21863
DNA (1173bp) protein (391aa)
putative glutamate carboxypeptidase, M20 family (EC:3.4.17.11)
Peptidase {ECO:0000313|EMBL:CKH88305.1}; EC=3.4.17.11 {ECO:0000313|EMBL:CKH88305.1};; Putative glutamate carboxypeptidase, M20 family {ECO:0000313|EMBL:CEJ99452.1}; EC=3.4.17.11 {ECO:0000313|EMBL:CEJ9
Peptidase M20/M25/M40 family protein n=6 Tax=Clostridium difficile RepID=T3GDN7_CLODC rbh
NECEvent2014_2_3_scaffold_108_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21877..22524
DNA (648bp) protein (216aa)
Nucleoside recognition family protein n=212 Tax=Clostridium difficile RepID=C9XPC7_CLODC rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL31121.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_108_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22526..23032
DNA (507bp) protein (169aa)
Nucleoside recognition family protein n=5 Tax=Clostridium difficile RepID=T2TXY6_CLODI rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ99450.1}; Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:CKH88236.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_2_3_scaffold_108_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23396..24508)
DNA (1113bp) protein (371aa)
Putative amino acid racemase n=5 Tax=Clostridium difficile RepID=Q183Q8_CLOD6 rbh
putative amino acid racemase
Putative amino acid racemase {ECO:0000313|EMBL:CAJ69707.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_108_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24896..25063
DNA (168bp) protein (56aa)
Dihydrofolate reductase family protein n=1 Tax=Clostridium difficile E10 RepID=U3VAJ8_CLODI
conserved hypothetical protein
Dihydrofolate reductase family protein {ECO:0000313|EMBL:CCK88219.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_108_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25308..27035
DNA (1728bp) protein (576aa)
ABC-type transport system, multidrug-familyATP-binding/permease protein (EC:3.6.3.-)
ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:CKH88170.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH88170.1};; ABC-type transport system, multidrug-familyATP-binding/permease protein {ECO:0000
ABC transporter family protein n=164 Tax=Clostridium difficile RepID=T3G8G8_CLODC rbh
NECEvent2014_2_3_scaffold_108_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27035..28825
DNA (1791bp) protein (597aa)
ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:CKH88142.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH88142.1};; ABC-type transport system, multidrug-family ATP-binding/permease protein {ECO:000
ABC transporter family protein n=198 Tax=Clostridium difficile RepID=C9XPC2_CLODC rbh
ABC transporter ATP-binding protein/permease
NECEvent2014_2_3_scaffold_108_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28987..29295)
DNA (309bp) protein (103aa)
Uncharacterized protein n=202 Tax=Clostridium difficile RepID=C9XPC1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ33238.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_108_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29557..30096)
DNA (540bp) protein (180aa)
L-2-amino-thiazoline-4-carboxylic acid hydrolase family protein n=171 Tax=Clostridium difficile RepID=T3G8J4_CLODC rbh
L-2-amino-thiazoline-4-carboxylic acid hydrolase family protein {ECO:0000313|EMBL:EQE60172.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
hypothetical protein
NECEvent2014_2_3_scaffold_108_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30208..30879)
DNA (672bp) protein (224aa)
Bacterial regulatory s, gntR family protein n=106 Tax=Clostridium difficile RepID=T3G8K4_CLODC rbh
Transcriptional regulator, GntR family
GntR family transcriptional regulator {ECO:0000313|EMBL:CKH88071.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDS88545.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_3_scaffold_108_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31290..32180
DNA (891bp) protein (297aa)
garR; Tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase {ECO:0000313|EMBL:CCL23185.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCL23185.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
2-hydroxy-3-oxopropionate reductase n=30 Tax=Clostridium difficile RepID=T3G9Q0_CLODC rbh
NECEvent2014_2_3_scaffold_108_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32316..33698
DNA (1383bp) protein (461aa)
H+ symporter family protein n=130 Tax=Clostridium difficile RepID=T3GBC4_CLODC rbh
Gluconate permease {ECO:0000313|EMBL:CKH88013.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Cl
gluconate permease
NECEvent2014_2_3_scaffold_108_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33769..35205
DNA (1437bp) protein (479aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3GDT1_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69699.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_108_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35391..36245)
DNA (855bp) protein (285aa)
Uncharacterized protein n=138 Tax=Clostridium difficile RepID=G6BTD6_CLODI rbh
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:CKH87960.1}; Putative membrane protein {ECO:0000313|EMBL:CDS89157.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
NECEvent2014_2_3_scaffold_108_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36513..36836)
DNA (324bp) protein (108aa)
Uncharacterized protein n=126 Tax=Clostridium difficile RepID=C9XPB4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK99303.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Displaying items 1-30 of 40 in total

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