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NECEvent2014_2_3_scaffold_145

Alias: 172_003_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_145_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56..256
DNA (201bp) protein (67aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=Q184F8_CLOD6
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG87856.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS88732.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_145_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(463..1053)
DNA (591bp) protein (197aa)
Dipicolinate synthase, B chain n=207 Tax=Clostridium difficile RepID=C9XPW8_CLODC rbh
spoVFB; dipicolinate synthase subunit B
Dipicolinic acid synthetase, B subunit {ECO:0000313|EMBL:EHJ26640.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_145_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1056..1931)
DNA (876bp) protein (292aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein n=141 Tax=Clostridium difficile RepID=T3GD52_CLODC rbh
spoVFA; Dipicolinate synthase subunit A
Dipicolinate synthase subunit A {ECO:0000313|EMBL:CDS89342.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_145_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2007..3398)
DNA (1392bp) protein (464aa)
AMP-binding protein {ECO:0000313|EMBL:CKG87760.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CKG87760.1};; Putative AMP-binding protein {ECO:0000313|EMBL:CEJ99608.1}; TaxID=1496 species="Bacteria; Firmicutes; Clo
AMP-binding enzyme family protein n=6 Tax=Clostridium difficile RepID=T3HJR5_CLODI rbh
putative AMP-binding protein
NECEvent2014_2_3_scaffold_145_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3402..4538)
DNA (1137bp) protein (379aa)
putative thiolase (EC:2.3.1.16)
Putative thiolase {ECO:0000313|EMBL:CEJ99609.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CEJ99609.1};; Thiolase {ECO:0000313|EMBL:CKG87733.1}; EC=2.3.1.174 {ECO:0000313|EMBL:CKG87733.1};; TaxID=1496 species="Ba
Acetyl-CoA C-acetyltransferase family protein n=28 Tax=Clostridium difficile RepID=T3GAK8_CLODC rbh
NECEvent2014_2_3_scaffold_145_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4570..5115)
DNA (546bp) protein (182aa)
BioY family protein n=194 Tax=Clostridium difficile RepID=T3G8X1_CLODC rbh
biotin synthase
Biotin synthase {ECO:0000313|EMBL:CCL31230.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15
NECEvent2014_2_3_scaffold_145_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5439..6218
DNA (780bp) protein (260aa)
Uncharacterized protein n=127 Tax=Clostridium difficile RepID=T3G7U9_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69866.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_145_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6673..7101)
DNA (429bp) protein (143aa)
Putative acetyltransferase {ECO:0000313|EMBL:CEJ99613.1}; EC=2.3.1.- {ECO:0000313|EMBL:CKG87662.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
Acetyltransferase family protein n=31 Tax=Clostridium difficile RepID=T3HJA7_CLODC
putative acetyltransferase
NECEvent2014_2_3_scaffold_145_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7702..7938)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium difficile (strain CD196) RepID=T3GC35_CLODC
Uncharacterised protein {ECO:0000313|EMBL:CEP41819.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
NECEvent2014_2_3_scaffold_145_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8884..9150)
DNA (267bp) protein (89aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
CRISPR-associated endoribonuclease Cas2 n=141 Tax=Clostridium difficile RepID=T3GCX7_CLODC
CRISPR-associated Cas2 family protein
NECEvent2014_2_3_scaffold_145_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9153..10133)
DNA (981bp) protein (327aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep
CRISPR-associated endonuclease Cas1 n=107 Tax=Clostridium difficile RepID=T3GAI3_CLODC rbh
putative CRISPR-associated Cas1 family protein
NECEvent2014_2_3_scaffold_145_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10136..10687)
DNA (552bp) protein (184aa)
CRISPR-associated protein Cas4 n=119 Tax=Clostridium difficile RepID=T3G8U2_CLODC rbh
Putative CRISPR-associated Cas4 family protein {ECO:0000313|EMBL:CCL23333.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=
hypothetical protein
NECEvent2014_2_3_scaffold_145_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10702..13023)
DNA (2322bp) protein (774aa)
CRISPR-associated nuclease/helicase Cas3 {ECO:0000313|EMBL:CKG87538.1}; EC=3.1.-.- {ECO:0000313|EMBL:CKG87538.1};; Putative CRISPR-associated Cas3 family helicase {ECO:0000313|EMBL:CEJ99618.1}; TaxID=
CRISPR-associated endonuclease Cas3-HD n=6 Tax=Clostridium difficile RepID=T3G7T5_CLODC rbh
putative CRISPR-associated Cas3 family helicase
NECEvent2014_2_3_scaffold_145_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13034..13735)
DNA (702bp) protein (234aa)
CRISPR-associated Cas5 domain protein n=135 Tax=Clostridium difficile RepID=C9XPZ9_CLODC rbh
hypothetical protein
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:CKG87508.1}; Putative CRISPR-associated Cas5 family protein {ECO:0000313|EMBL:CEJ99619.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostr
NECEvent2014_2_3_scaffold_145_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13737..14651)
DNA (915bp) protein (305aa)
CRISPR-associated autoregulator DevR family protein n=31 Tax=Clostridium difficile RepID=T3GCY0_CLODC rbh
putative CRISPR-associated autoregulator DevRfamily protein protein
Putative CRISPR-associated autoregulator DevR family protein protein {ECO:0000313|EMBL:CCL23336.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
NECEvent2014_2_3_scaffold_145_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14653..16530)
DNA (1878bp) protein (626aa)
CRISPR-associated family protein n=28 Tax=Clostridium difficile RepID=T3GAI8_CLODC rbh
putative CRISPR-associated protein, CXXC-CXXC
Putative CRISPR-associated protein, CXXC-CXXC {ECO:0000313|EMBL:CAJ69875.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_145_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16536..17273)
DNA (738bp) protein (246aa)
CRISPR-associated endoribonuclease Cas6 n=28 Tax=Clostridium difficile RepID=T3G8U8_CLODC rbh
putative CRISPR-associated Cas6 family protein
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:CKG87418.1}; Putative CRISPR-associated Cas6 family protein {ECO:0000313|EMBL:CEJ99622.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_145_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17351..18268)
DNA (918bp) protein (306aa)
WYL domain protein n=8 Tax=Clostridium difficile RepID=U4Z3D1_CLODI rbh
putative Helix-Turn-Helix DNA-binding protein
Putative Helix-Turn-Helix DNA-binding protein {ECO:0000313|EMBL:CAJ69877.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_145_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18548..20464)
DNA (1917bp) protein (639aa)
FtsX-like permease family protein n=44 Tax=Clostridium difficile RepID=T3GC05_CLODC rbh
ABC-type transport system, permease
ABC transporter permease {ECO:0000313|EMBL:CKG87378.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEJ99624.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
NECEvent2014_2_3_scaffold_145_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20464..21210)
DNA (747bp) protein (249aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL31235.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL31235.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost
ABC transporter family protein n=157 Tax=Clostridium difficile RepID=C9XQ05_CLODC rbh
ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_145_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21314..22165)
DNA (852bp) protein (284aa)
uppP2; Undecaprenyl-diphosphatase 2 (Undecaprenylpyrophosphate phosphatase 2) (Bacitracin resistanceprotein 2) (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=128 Tax=Clostridium difficile RepID=T3GAB2_CLODC rbh
NECEvent2014_2_3_scaffold_145_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22413..23417)
DNA (1005bp) protein (335aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=127 Tax=Clostridium difficile RepID=T3G8M2_CLODC rbh
Two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_145_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23427..24119)
DNA (693bp) protein (231aa)
Response regulator n=211 Tax=Clostridium difficile RepID=C9XQ08_CLODC rbh
two-component system esponse regulator
Two-component response regulator {ECO:0000313|EMBL:CCL31238.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_145_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24433..25392)
DNA (960bp) protein (320aa)
ABC transporter, substrate-binding , aliphatic sulfonates family protein n=148 Tax=Clostridium difficile RepID=T3GBX1_CLODC rbh
ssuA2; ABC-type transport system, sulfonate-familyextracellular solute-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CKG87224.1}; ABC-type transport system, sulfonate-familyextracellular solute-binding protein {ECO:0000313|EMBL:CEJ99629.1}; TaxID=1496 speci
NECEvent2014_2_3_scaffold_145_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25425..26303)
DNA (879bp) protein (293aa)
ssuB2; ABC-type transport system, sulfonate-familyATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKG87200.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKG87200.1};; ABC-type transport system, sulfonate-familyATP-binding protein {ECO:0000313|EMBL:CEJ99630.
ABC transporter family protein n=92 Tax=Clostridium difficile RepID=T3GCS6_CLODC rbh
NECEvent2014_2_3_scaffold_145_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26296..27078)
DNA (783bp) protein (261aa)
Binding--dependent transport system inner membrane component family protein n=179 Tax=Clostridium difficile RepID=T3GAB7_CLODC rbh
ssuC2; ABC-type transport system, sulfonate-familypermease
ABC-type transport system, sulfonate-family permease {ECO:0000313|EMBL:CCL23347.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" s
NECEvent2014_2_3_scaffold_145_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27079..27708)
DNA (630bp) protein (210aa)
Uncharacterized protein n=93 Tax=Clostridium difficile RepID=T3G8M6_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL23348.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_145_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28090..31269
DNA (3180bp) protein (1060aa)
Type III restriction enzyme, res subunit n=35 Tax=Clostridium difficile RepID=T2TXL6_CLODI rbh
Putative DEAD-like helicase {ECO:0000313|EMBL:CAJ69064.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
putative DEAD-like helicase
NECEvent2014_2_3_scaffold_145_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31399..31533)
DNA (135bp) protein (45aa)
MerR HTH regulatory family protein n=2 Tax=Clostridium difficile RepID=T3UF15_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87452.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_145_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31554..32318)
DNA (765bp) protein (255aa)
Aromatic compounds hydrolase {ECO:0000313|EMBL:CKH24079.1}; EC=3.7.1.8 {ECO:0000313|EMBL:CKH24079.1};; Putative alpha/beta hydrolase {ECO:0000313|EMBL:CEJ98785.1}; TaxID=1496 species="Bacteria; Firmic
Alpha/beta hydrolase fold family protein n=6 Tax=Clostridium difficile RepID=T3GLF7_CLODC rbh
alpha/beta hydrolase
Displaying items 1-30 of 33 in total

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