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NECEvent2014_2_3_scaffold_175

Alias: 172_003_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_175_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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158..445
DNA (288bp) protein (96aa)
Uncharacterized protein n=59 Tax=Clostridium difficile RepID=U3WDB1_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CKH09597.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
hypothetical protein
NECEvent2014_2_3_scaffold_175_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

470..568
DNA (99bp) protein (33aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium difficile Y384 RepID=T4HSA9_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CKH09616.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_175_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(984..1535)
DNA (552bp) protein (184aa)
Helix-turn-helix family protein n=172 Tax=Clostridium difficile RepID=C9XQM8_CLODC rbh
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CDS86944.1}; Transcriptional regulator {ECO:0000313|EMBL:CKH09637.1}; Transcriptional regulator, RmlC-type {ECO:0000313|EMBL:CDS87275.1}; TaxID=149
NECEvent2014_2_3_scaffold_175_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1726..2688
DNA (963bp) protein (321aa)
Cysteine synthase A n=158 Tax=Clostridium difficile RepID=C9XQM9_CLODC rbh
cysteine synthase A
Cysteine synthase A {ECO:0000313|EMBL:CBE04212.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_175_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2983..3363
DNA (381bp) protein (127aa)
putative membrane glycerophosphoryl diesterphosphodiesterase (EC:3.1.4.46)
Putative membrane glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CAJ68532.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CAJ68532.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostri
Glycerophosphoryl diester phosphodiesterase family protein n=11 Tax=Clostridium difficile RepID=T2UQY4_CLODI
NECEvent2014_2_3_scaffold_175_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3335..3988
DNA (654bp) protein (218aa)
putative membrane glycerophosphoryl diesterphosphodiesterase (EC:3.1.4.46)
Putative membrane glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CAJ68532.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CAJ68532.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostri
Glycerophosphoryl diester phosphodiesterase family protein n=9 Tax=Clostridium difficile RepID=T3N8M3_CLODI rbh
NECEvent2014_2_3_scaffold_175_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4293..4823
DNA (531bp) protein (177aa)
maltose O-acetyltransferase (EC:2.3.1.79)
Putative maltose O-acetyltransferase {ECO:0000313|EMBL:CAJ68533.1}; EC=2.3.1.79 {ECO:0000313|EMBL:CAJ68533.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Bacterial transferase hexapeptide family protein n=20 Tax=Clostridium difficile RepID=T3H5Y9_CLODC rbh
NECEvent2014_2_3_scaffold_175_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5926..6147)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BY17_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ24933.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
conserved hypothetical protein
NECEvent2014_2_3_scaffold_175_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6677..7699
DNA (1023bp) protein (341aa)
ABC-2 transporter family protein n=8 Tax=Clostridium difficile RepID=T3H2E6_CLODC rbh
putative membrane protein
ABC-type transport system involved in multi-copper enzyme maturation%2C permease component {ECO:0000313|EMBL:CKH09773.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ98264.1}; TaxID=1496 species="B
NECEvent2014_2_3_scaffold_175_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7713..8600
DNA (888bp) protein (296aa)
multidrug family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH09793.1}; ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CDS86950.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS86950.
ABC transporter family protein n=27 Tax=Clostridium difficile RepID=T3H748_CLODC rbh
NECEvent2014_2_3_scaffold_175_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8606..9379
DNA (774bp) protein (258aa)
ABC-type transport system, multidrug-family permease n=46 Tax=Clostridium difficile RepID=Q186M5_CLOD6 rbh
ABC-type transport system, multidrug-familypermease
ABC transporter permease {ECO:0000313|EMBL:CKH09815.1}; ABC-type transport system, multidrug-familypermease {ECO:0000313|EMBL:CEJ98266.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_3_scaffold_175_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9491..10216
DNA (726bp) protein (242aa)
Transcriptional regulatory family protein n=65 Tax=Clostridium difficile RepID=T3H3F9_CLODC rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CEJ98267.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_175_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10220..11623
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Two-component sensor histidine kinase n=16 Tax=Clostridium difficile RepID=Q186M9_CLOD6 rbh
Two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_175_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11634..12458
DNA (825bp) protein (275aa)
TraX family protein n=6 Tax=Clostridium difficile RepID=T3H6H8_CLODC rbh
protein trax
Protein trax {ECO:0000313|EMBL:CAJ68539.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain
NECEvent2014_2_3_scaffold_175_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12557..12742
DNA (186bp) protein (62aa)
Uncharacterized protein n=15 Tax=Clostridium difficile RepID=F3Y5T8_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA62830.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_175_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12783..13403)
DNA (621bp) protein (207aa)
NADPH-dependent FMN reductase family protein n=148 Tax=Clostridium difficile RepID=T3H6U0_CLODC rbh
putative NADPH-dependent FMN reductase
NADPH-dependent FMN reductase family protein {ECO:0000313|EMBL:EQH99350.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_175_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13669..14001
DNA (333bp) protein (111aa)
HxlR-like helix-turn-helix family protein n=219 Tax=Clostridium difficile RepID=C9XQN9_CLODC
transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EHJ26395.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_175_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14121..14762)
DNA (642bp) protein (214aa)
pcp; pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {
Pyrrolidone-carboxylate peptidase n=7 Tax=Clostridium difficile RepID=PCP_CLOD6 rbh
NECEvent2014_2_3_scaffold_175_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14783..15715)
DNA (933bp) protein (311aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=G6BPM5_CLODI rbh
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65435.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_175_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15737..16402)
DNA (666bp) protein (222aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=T3H2N3_CLODC rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL21842.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_175_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16533..16796)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=Q186N6_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68545.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_175_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16972..17451)
DNA (480bp) protein (160aa)
Flavodoxin domain protein n=6 Tax=Clostridium difficile RepID=T2U2K3_CLODI rbh
putative flavodoxin
Putative flavodoxin {ECO:0000313|EMBL:CAJ68546.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_175_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17454..17858)
DNA (405bp) protein (135aa)
FMN-binding domain protein n=156 Tax=Clostridium difficile RepID=C9XQP5_CLODC
FMN-binding exported protein
Putative FMN-binding protein {ECO:0000313|EMBL:CAJ68547.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_175_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17833..18462)
DNA (630bp) protein (210aa)
Bacterial regulatory s, tetR family protein n=6 Tax=Clostridium difficile RepID=T3H127_CLODC rbh
Transcriptional regulator, TetR family
TetR family transcriptional regulator {ECO:0000313|EMBL:CKH10122.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ98279.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_3_scaffold_175_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18971..19939
DNA (969bp) protein (323aa)
iunH; putative nucleoside hydrolase, IUNH family (EC:3.2.2.1)
Inosine-uridine preferring nucleoside hydrolase family protein n=120 Tax=Clostridium difficile RepID=T3H5M0_CLODC rbh
Inosine-uridine preferring nucleoside hydrolase family protein {ECO:0000313|EMBL:EQE65446.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_175_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19941..20504
DNA (564bp) protein (188aa)
Uncharacterized protein n=170 Tax=Clostridium difficile RepID=G6BY00_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL29887.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_175_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20512..21201
DNA (690bp) protein (230aa)
Radical SAM superfamily protein n=6 Tax=Clostridium difficile RepID=T3H3Y0_CLODC rbh
radical SAM superfamily protein
Putative radical SAM superfamily protein {ECO:0000313|EMBL:CAJ68551.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_3_scaffold_175_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21328..22056
DNA (729bp) protein (243aa)
DNA alkylation repair enzyme family protein n=6 Tax=Clostridium difficile RepID=T3H2F4_CLODC rbh
putative binding protein
Putative binding protein {ECO:0000313|EMBL:CAJ68552.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_175_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22070..22744
DNA (675bp) protein (225aa)
Transcriptional regulator, repressor-like n=10 Tax=Clostridium difficile RepID=Q186P3_CLOD6 rbh
Transcriptional regulator, repressor-like
Transcriptional regulator, repressor-like {ECO:0000313|EMBL:CAJ68553.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
NECEvent2014_2_3_scaffold_175_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22770..23606
DNA (837bp) protein (279aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=Q186P2_CLOD6 rbh
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CCL29891.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Displaying items 1-30 of 38 in total

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