Alias: 172_003_scaffold_193
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
NECEvent2014_2_3_scaffold_193_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(124..351)
|
30S ribosomal protein S18 n=219 Tax=Clostridium difficile RepID=RS18_CLOD6
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
|
|
NECEvent2014_2_3_scaffold_193_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(370..804)
|
Single-stranded DNA-binding protein n=204 Tax=Clostridium difficile RepID=C9XSW4_CLODC
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997827 species="Bacteria; Firmicutes; Clostrid
|
|
NECEvent2014_2_3_scaffold_193_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(841..1119)
|
30S ribosomal protein S6 n=207 Tax=Clostridium difficile RepID=RS6_CLOD6
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
|
|
NECEvent2014_2_3_scaffold_193_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1333..2529)
|
aminotransferase (EC:2.6.1.-)
2-aminoadipate transaminase {ECO:0000313|EMBL:CDS90420.1}; EC=2.6.1.39 {ECO:0000313|EMBL:CDS90420.1};; Amino acid aminotransferase {ECO:0000313|EMBL:CKG66193.1}; EC=2.6.1.39 {ECO:0000313|EMBL:CKG66193
Multiple substrate aminotransferase n=196 Tax=Clostridium difficile RepID=T3FWL6_CLODC
rbh
|
|
NECEvent2014_2_3_scaffold_193_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2628..2816)
|
Uncharacterized protein n=176 Tax=Clostridium difficile RepID=C9XSW7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70574.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
|
|
NECEvent2014_2_3_scaffold_193_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2831..3094)
|
Uncharacterized protein n=207 Tax=Clostridium difficile RepID=C9XSW8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70575.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
|
|
NECEvent2014_2_3_scaffold_193_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3167..3769)
|
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=C9XSW9_CLODC
rbh
hypothetical protein
Selenium metabolism protein yedf {ECO:0000313|EMBL:CAJ70576.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
|
|
NECEvent2014_2_3_scaffold_193_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3874..5166)
|
Helix-turn-helix family protein n=99 Tax=Clostridium difficile RepID=T3FXH9_CLODC
rbh
transcriptional regulator
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EHJ28951.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
|
|
NECEvent2014_2_3_scaffold_193_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5426..6001
|
Sporulation and spore germination family protein n=66 Tax=Clostridium difficile RepID=T3G0D2_CLODC
rbh
intron RNA domain IV
Putative exported protein {ECO:0000313|EMBL:CAJ70578.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
|
|
NECEvent2014_2_3_scaffold_193_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(6135..7277)
|
putative cysteine desulfurase family protein (EC:2.8.1.7)
Putative cysteine desulfurase family protein {ECO:0000313|EMBL:CEK00391.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CEK00391.1};; Selenocysteine lyase {ECO:0000313|EMBL:CKG66002.1}; EC=2.8.1.7 {ECO:0000313|EMBL:
Aminotransferase class-V family protein n=64 Tax=Clostridium difficile RepID=T3G1C6_CLODC
rbh
|
|
NECEvent2014_2_3_scaffold_193_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7310..8173)
|
Stage 0 sporulation protein J n=211 Tax=Clostridium difficile RepID=C9XSX3_CLODC
rbh
spo0J; stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:EQE58644.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
|
|
NECEvent2014_2_3_scaffold_193_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8175..8948)
|
Sporulation initiation inhibitor protein soj n=59 Tax=Clostridium difficile RepID=T3FXG4_CLODC
rbh
soj; Transcriptional regulator, sporulationinitiation inhibitor, chromosome partitioning protein
Chromosome partitioning protein transcriptional regulator {ECO:0000313|EMBL:CDS90437.1}; Sporulation initiation inhibitor {ECO:0000313|EMBL:CKG65918.1}; Transcriptional regulator, sporulation initiati
|
|
NECEvent2014_2_3_scaffold_193_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9083..9868)
|
ParB/RepB/Spo0J family partition domain protein n=211 Tax=Clostridium difficile RepID=C9XSX5_CLODC
rbh
stage 0 sporulation protein
Putative nucleoid occlusion protein {ECO:0000313|EMBL:EHJ28961.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
|
|
NECEvent2014_2_3_scaffold_193_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10031..10750)
|
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=52 Tax=Clostridium difficile RepID=T3G0D8_CLODC
rbh
gidB; 16S rRNA methyltransferase GidB
|
|
NECEvent2014_2_3_scaffold_193_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10743..12638)
|
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=64 Tax=Clostridium difficile RepID=MNMG_CLOD6
rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=272563 species="Bacter
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
|
|
NECEvent2014_2_3_scaffold_193_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12733..14112)
|
mnmE; tRNA modification GTPase TrmE (EC:3.6.-.-)
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
tRNA modification GTPase MnmE n=126 Tax=Clostridium difficile RepID=MNME_CLOD6
rbh
|
|
NECEvent2014_2_3_scaffold_193_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14224..14853)
|
R3H domain protein n=188 Tax=Clostridium difficile RepID=G6BQI9_CLODI
rbh
SpoIIIJ-associated RNA/ssDNA-binding protein Jag
Putative SpoIIIJ-associated RNA/ssDNA-binding protein Jag {ECO:0000313|EMBL:CCL31917.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
|
|
NECEvent2014_2_3_scaffold_193_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14822..15529)
|
Membrane insertase, YidC/Oxa1 family domain protein n=210 Tax=Clostridium difficile RepID=C9XSY0_CLODC
rbh
sporulation membrane protein
Membrane insertase, YidC/Oxa1 family domain protein {ECO:0000313|EMBL:EQE58612.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
|
|
NECEvent2014_2_3_scaffold_193_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15561..15818)
|
Putative membrane protein insertion efficiency factor n=64 Tax=Clostridium difficile RepID=G6BQI7_CLODI
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
hypothetical protein
|
|
NECEvent2014_2_3_scaffold_193_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15844..16188)
|
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=205 Tax=Clostridium difficile RepID=RNPA_CLOD6
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
|
|
NECEvent2014_2_3_scaffold_193_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16266..16403)
|
50S ribosomal protein L34 n=220 Tax=Clostridium difficile RepID=C9XSY3_CLODC
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
|
|
NECEvent2014_2_3_scaffold_193_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17062..18381
|
Chromosomal replication initiator protein DnaA n=217 Tax=Clostridium difficile RepID=C9XIB3_CLODC
rbh
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
|
|
NECEvent2014_2_3_scaffold_193_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18623..19729
|
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1215061 species="Bacte
DNA polymerase III subunit beta n=205 Tax=Clostridium difficile RepID=T3ILJ2_CLODC
rbh
dnaN; DNA polymerase III subunit beta
|
|
NECEvent2014_2_3_scaffold_193_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19866..20072
|
S4 domain protein n=211 Tax=Clostridium difficile RepID=T3IKA0_CLODC
RNA-binding mediating protein
Putative RNA-binding mediating protein {ECO:0000313|EMBL:CCK94035.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
|
|
NECEvent2014_2_3_scaffold_193_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
20090..21205
|
DNA replication and repair protein RecF n=178 Tax=Clostridium difficile RepID=RECF_CLOD6
rbh
DNA replication and repair protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
|
|
NECEvent2014_2_3_scaffold_193_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21206..23107
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1496 species="Bacteria; Firm
DNA gyrase subunit B n=128 Tax=Clostridium difficile RepID=C9XIB7_CLODC
rbh
gyrB; DNA gyrase subunit B
|
|
NECEvent2014_2_3_scaffold_193_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
23127..25553
|
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=156 Tax=Clostridium difficile RepID=Q18C90_CLOD6
rbh
|
|
NECEvent2014_2_3_scaffold_193_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
25622..25918
|
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=Q18C91_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28908.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
|
|
NECEvent2014_2_3_scaffold_193_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
25918..26178
|
Uncharacterized protein n=216 Tax=Clostridium difficile RepID=Q18C95_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG73158.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
|
|
NECEvent2014_2_3_scaffold_193_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26190..26507
|
Anti-sigma factor antagonist n=11 Tax=Clostridium difficile RepID=T2XC16_CLODI
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
anti-sigma-B factor antagonist
|