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NECEvent2014_2_3_scaffold_198

Alias: 172_003_scaffold_198

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_198_1
Drosophila mojavensis, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(1..174)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium difficile DA00197 RepID=T3TBI9_CLODI
GI15309 gene product from transcript GI15309-RA
GI15309 {ECO:0000313|EMBL:EDW06684.1}; TaxID=7230 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroid
NECEvent2014_2_3_scaffold_198_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(308..1885)
DNA (1578bp) protein (526aa)
Cell wall binding repeat 2 family protein n=13 Tax=Clostridium difficile RepID=T3G8Z3_CLODC rbh
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQE60155.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
cwp5; putative cell surface protein cwp5
NECEvent2014_2_3_scaffold_198_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2182..4593)
DNA (2412bp) protein (804aa)
Cell wall binding repeat 2 family protein n=32 Tax=Clostridium difficile RepID=T3GDF8_CLODC rbh
cwp84; cell surface-associated cysteine protease
Cell surface protein (Putative cell surface-associated cysteine protease) {ECO:0000313|EMBL:CBE06187.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
NECEvent2014_2_3_scaffold_198_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4821..5222
DNA (402bp) protein (134aa)
GtrA-like family protein n=33 Tax=Clostridium difficile RepID=T2TXV9_CLODI
putative membrane protein, GtrA family
Cell wall teichoic acid glycosylation protein {ECO:0000313|EMBL:CKH87177.1}; Putative membrane protein, GtrA family {ECO:0000313|EMBL:CEJ99416.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia;
NECEvent2014_2_3_scaffold_198_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5266..7098)
DNA (1833bp) protein (611aa)
Cell wall binding repeat 2 family protein n=35 Tax=Clostridium difficile RepID=T3GDA6_CLODC rbh
Cwp66 {ECO:0000313|EMBL:AAG13990.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium dif
cell surface protein
NECEvent2014_2_3_scaffold_198_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7131..7838)
DNA (708bp) protein (236aa)
GlcNAc-PI de-N-acetylase family protein n=41 Tax=Clostridium difficile RepID=T3GE12_CLODC rbh
putative LmbE-like deacetylase
Putative LmbE-like deacetylase {ECO:0000313|EMBL:CEJ99418.1}; Uncharacterized proteins%2C LmbE homologs {ECO:0000313|EMBL:CKH87255.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridial
NECEvent2014_2_3_scaffold_198_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7945..9816)
DNA (1872bp) protein (624aa)
Cell wall binding repeat 2 family protein n=31 Tax=Clostridium difficile RepID=T3GBL7_CLODC rbh
Cell wall binding protein cwp2 {ECO:0000313|EMBL:CAJ69679.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
cwp2; Cell wall binding protein cwp2
NECEvent2014_2_3_scaffold_198_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10231..12576)
DNA (2346bp) protein (782aa)
Protein translocase subunit SecA n=32 Tax=Clostridium difficile RepID=T2TVU0_CLODI rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
secA2; Protein translocase subunit secA 2
NECEvent2014_2_3_scaffold_198_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12823..15042)
DNA (2220bp) protein (740aa)
Cell wall binding repeat 2 family protein n=34 Tax=Clostridium difficile RepID=T3G8S5_CLODC rbh
S-layer protein {ECO:0000313|EMBL:AAZ05991.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clost
S-layer precursor protein
NECEvent2014_2_3_scaffold_198_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15254..16843)
DNA (1590bp) protein (530aa)
Bacterial Ig-like domain family protein n=8 Tax=Clostridium difficile RepID=T2UEG6_CLODI rbh
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:EQE60246.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
surface protein
NECEvent2014_2_3_scaffold_198_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17062..18657)
DNA (1596bp) protein (532aa)
Cell wall binding repeat 2 family protein n=24 Tax=Clostridium difficile RepID=T3GBK6_CLODC rbh
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQE60244.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
cwp11; Cell wall binding protein cwp11
NECEvent2014_2_3_scaffold_198_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19030..20910)
DNA (1881bp) protein (627aa)
Cell wall binding repeat 2 family protein n=24 Tax=Clostridium difficile RepID=T3G9Y3_CLODC rbh
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQE60255.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
cwp10; Cell surface protein cwp10
NECEvent2014_2_3_scaffold_198_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21120..27083)
DNA (5964bp) protein (1988aa)
Fibronectin type III domain protein n=5 Tax=Clostridium difficile RepID=T3G8S1_CLODC rbh
Fibronectin type III domain protein {ECO:0000313|EMBL:EQE60217.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
putative calcium-binding adhesion protein
Displaying 13 items

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