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NECEvent2014_2_3_scaffold_231

Alias: 172_003_scaffold_231

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_231_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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492..1898
DNA (1407bp) protein (469aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CEJ97366.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CEJ97366.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
Aryl-phospho-beta-D-glucosidase BglC n=25 Tax=Clostridium difficile RepID=T3I4I3_CLODC rbh
NECEvent2014_2_3_scaffold_231_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1926..2774
DNA (849bp) protein (283aa)
PRD domain protein n=136 Tax=Clostridium difficile RepID=C9XM49_CLODC rbh
transcription antiterminator
Putative transcription antiterminator {ECO:0000313|EMBL:CBE02768.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_231_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3411..4127
DNA (717bp) protein (239aa)
Two-component response regulator n=2 Tax=Clostridium difficile RepID=C9XM50_CLODC rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CBE02769.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_231_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4130..5059
DNA (930bp) protein (310aa)
two-component sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Two-component sensor histidine kinase n=27 Tax=Clostridium difficile RepID=Q18A16_CLOD6 rbh
NECEvent2014_2_3_scaffold_231_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5207..6130
DNA (924bp) protein (308aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CCL20938.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL20938.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clost
ABC-type transport system, multidrug-family ATP-binding protein n=181 Tax=Clostridium difficile RepID=Q18A20_CLOD6 rbh
NECEvent2014_2_3_scaffold_231_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6114..6884
DNA (771bp) protein (257aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6BUV4_CLODI rbh
lantibiotic ABC transporter permease
Putative lantibiotic ABC transporter, permease protein {ECO:0000313|EMBL:CBE02774.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_231_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6894..7676
DNA (783bp) protein (261aa)
ABC-2 transporter family protein n=133 Tax=Clostridium difficile RepID=T3I3I4_CLODC rbh
ABC-type transport system, multidrug-familypermease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE68652.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_231_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8053..8589
DNA (537bp) protein (179aa)
Rubrerythrin n=199 Tax=Clostridium difficile RepID=C9XM55_CLODC rbh
rbr; rubrerythrin
Rubrerythrin family protein {ECO:0000313|EMBL:EQG78340.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_231_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8621..9010
DNA (390bp) protein (130aa)
Ferric uptake regulator family protein n=26 Tax=Clostridium difficile RepID=T3I4F4_CLODC
ferric-uptake regulator
Putative ferric-uptake regulator {ECO:0000313|EMBL:CAJ67660.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_231_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9047..9433
DNA (387bp) protein (129aa)
rbo; Rubredoxin oxidoreductase (desulfoferrodoxin) (EC:1.15.1.1)
Desulfoferrodoxin ferrous iron-binding domain protein n=185 Tax=Clostridium difficile RepID=T3I3E8_CLODC
Putative superoxide reductase {ECO:0000313|EMBL:EHJ31148.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_231_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9560..11002
DNA (1443bp) protein (481aa)
Rubredoxin family protein n=156 Tax=Clostridium difficile RepID=T3I8C9_CLODC rbh
putative oxidative stress glutamate synthase
Putative oxidative stress glutamate synthase {ECO:0000313|EMBL:CCL20944.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_231_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11299..12114
DNA (816bp) protein (272aa)
Metallo-beta-lactamase superfamily protein n=27 Tax=Clostridium difficile RepID=T3I9G5_CLODC rbh
putative metallo-beta-lactamase superfamilyprotein
Metallo-beta-lactamase {ECO:0000313|EMBL:CKH57222.1}; Putative metallo-beta-lactamase superfamilyprotein {ECO:0000313|EMBL:CEJ97377.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridia
NECEvent2014_2_3_scaffold_231_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12716..13900
DNA (1185bp) protein (395aa)
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=G6BUU7_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02787.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_231_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14277..15404)
DNA (1128bp) protein (376aa)
DEAD/DEAH box helicase n=6 Tax=Clostridium difficile RepID=D5Q162_CLODI rbh
ATP-dependent RNA helicase
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:CCL20947.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_231_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15849..17042
DNA (1194bp) protein (398aa)
aksA; Trans-homoaconitate synthase (EC:2.3.-.-)
Trans-homoaconitate synthase {ECO:0000313|EMBL:CCL32931.1}; EC=2.3.-.- {ECO:0000313|EMBL:CCL32931.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
Homocitrate synthase n=201 Tax=Clostridium difficile RepID=T3I3Z9_CLODC rbh
NECEvent2014_2_3_scaffold_231_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17067..18992
DNA (1926bp) protein (642aa)
acnB; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase {ECO:0000313|EMBL:CKH57062.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CKH57062.1};; EC=4.2.1.85 {ECO:0000313|EMBL:CKH57062.1};; Aconitate hydratase (Citrate hydro-lyase) {ECO:0000313|EMBL:CE
Aconitase family protein n=113 Tax=Clostridium difficile RepID=T3I2Z0_CLODC rbh
NECEvent2014_2_3_scaffold_231_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19014..20009
DNA (996bp) protein (332aa)
icd; Isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate/isopropylmalate dehydrogenase family protein n=188 Tax=Clostridium difficile RepID=T3I7Y2_CLODC rbh
Isocitrate/isopropylmalate dehydrogenase family protein {ECO:0000313|EMBL:EQG78318.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
NECEvent2014_2_3_scaffold_231_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20335..20808
DNA (474bp) protein (158aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=16 Tax=Clostridium difficile RepID=T3NBX3_CLODI rbh
MarR family transcriptional regulator
MarR-family transcriptional regulator {ECO:0000313|EMBL:CBE02796.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_231_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20842..21336
DNA (495bp) protein (165aa)
Acetyltransferase family protein n=138 Tax=Clostridium difficile RepID=C9XM66_CLODC rbh
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCL32935.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_231_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21433..21954
DNA (522bp) protein (174aa)
Nitroreductase family protein n=62 Tax=Clostridium difficile RepID=T3I404_CLODC rbh
putative nitroreductase
Putative nitroreductase {ECO:0000313|EMBL:CCL32936.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_231_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22143..22454
DNA (312bp) protein (104aa)
Uncharacterized protein n=215 Tax=Clostridium difficile RepID=G6B6Z8_CLODI
DNA-binding protein
Putative dNA-binding protein {ECO:0000313|EMBL:EQG78378.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_231_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22482..23168
DNA (687bp) protein (229aa)
CAAX protease self-immunity family protein n=162 Tax=Clostridium difficile RepID=T3I7Y6_CLODC rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL32938.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
Displaying 22 items

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