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NECEvent2014_2_3_scaffold_243

Alias: 172_003_scaffold_243

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_243_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(123..1070)
DNA (948bp) protein (316aa)
Uncharacterized protein n=51 Tax=Clostridium difficile RepID=Q185X3_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69069.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_243_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1098..1589)
DNA (492bp) protein (164aa)
Putative phage-like protein n=1 Tax=Clostridium difficile T22 RepID=U3WKH2_CLODI rbh
putative phage-like protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62590.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_243_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2032..2925)
DNA (894bp) protein (298aa)
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein n=130 Tax=Clostridium difficile RepID=T3GJU4_CLODC rbh
putative phage-related cell wall hydrolase
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein {ECO:0000313|EMBL:EQE62529.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_243_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3151..5436)
DNA (2286bp) protein (762aa)
mapA; Maltose phosphorylase/glycosylhydrolase/vacuolar acid trehalase (EC:2.4.1.8)
Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase n=47 Tax=Clostridium difficile RepID=Q185X8_CLOD6 rbh
Glycosyl hydrolase family 65 central catalytic domain protein {ECO:0000313|EMBL:EQG76777.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
NECEvent2014_2_3_scaffold_243_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5433..6113)
DNA (681bp) protein (227aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:CKH24312.1}; EC=5.4.2.6 {ECO:0000313|EMBL:CKH24312.1};; Beta-phosphoglucomutase (Beta-D-Glucose 1,6-phosphomutase) {ECO:0000313|EMBL:CDT14944.1}; EC=5.4.2.6 {
Beta-phosphoglucomutase n=194 Tax=Clostridium difficile RepID=C9XKZ0_CLODC rbh
beta-phosphoglucomutase
NECEvent2014_2_3_scaffold_243_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6337..8220)
DNA (1884bp) protein (628aa)
Cyclomaltodextrinase (maltogenic alpha-amylase)(cyclomaltodextrin dextrin-hydrolase (decyclizing)) (EC:3.2.1.54)
Cyclomaltodextrinase (Maltogenic alpha-amylase) (Cyclomaltodextrin dextrin-hydrolase (Decyclizing)) {ECO:0000313|EMBL:CCL22496.1}; EC=3.2.1.54 {ECO:0000313|EMBL:CCL22496.1};; TaxID=1215067 species="Ba
Neopullulanase n=145 Tax=Clostridium difficile RepID=T3GI18_CLODC rbh
NECEvent2014_2_3_scaffold_243_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8478..9299)
DNA (822bp) protein (274aa)
Histidinol phosphate phosphatase, HisJ family protein n=117 Tax=Clostridium difficile RepID=T3GHW0_CLODC rbh
phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:CCL22497.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_243_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9490..9843)
DNA (354bp) protein (118aa)
Putative membrane protein n=38 Tax=Clostridium difficile RepID=Q185X9_CLOD6
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69076.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_243_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9885..11327)
DNA (1443bp) protein (481aa)
Cell surface protein n=183 Tax=Clostridium difficile RepID=C9XKZ4_CLODC rbh
cell surface protein
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein {ECO:0000313|EMBL:EQH98999.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_243_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12003..13214
DNA (1212bp) protein (404aa)
ROK family protein n=138 Tax=Clostridium difficile RepID=T3GL55_CLODC rbh
ROK protein
ROK family protein {ECO:0000313|EMBL:EQE62572.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_243_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13306..13821
DNA (516bp) protein (172aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
Ferritin n=179 Tax=Clostridium difficile RepID=C9XKZ6_CLODC rbh
ferritin
NECEvent2014_2_3_scaffold_243_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14088..16187)
DNA (2100bp) protein (700aa)
Succinyl-CoA ligase like flavodoxin domain protein n=6 Tax=Clostridium difficile RepID=T3GL22_CLODC rbh
putative succinyl-CoA synthetase-likeATP-binding protein
Acetyl-CoA synthetase {ECO:0000313|EMBL:CKH24534.1}; Putative succinyl-CoA synthetase-likeATP-binding protein {ECO:0000313|EMBL:CEJ98800.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clost
NECEvent2014_2_3_scaffold_243_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16311..16850)
DNA (540bp) protein (180aa)
ferredoxin/flavodoxin oxidoreductase subunit gamma (EC:1.2.7.-)
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein n=189 Tax=Clostridium difficile RepID=T3GLN5_CLODC rbh
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein {ECO:0000313|EMBL:EQE62585.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_243_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16853..17593)
DNA (741bp) protein (247aa)
Thiamine pyrophosphate enzyme, TPP binding domain protein n=184 Tax=Clostridium difficile RepID=G6BPY5_CLODI rbh
subunit of oxidoreductase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EQE62533.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
NECEvent2014_2_3_scaffold_243_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17595..18644)
DNA (1050bp) protein (350aa)
Putative ferredoxin/flavodoxin oxidoreductase,alpha subunit {ECO:0000313|EMBL:CCL30420.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL30420.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridi
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg family protein n=147 Tax=Clostridium difficile RepID=T2TH68_CLODI rbh
subunit of oxidoreductase
NECEvent2014_2_3_scaffold_243_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18661..18897)
DNA (237bp) protein (79aa)
Ketoisovalerate oxidoreductase subunit vorC n=13 Tax=Clostridium difficile RepID=T3P3T7_CLODI
putative 4Fe-4S ferredoxin iron-sulfur bindingdomain-containing protein
Putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CCK98618.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
NECEvent2014_2_3_scaffold_243_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18912..20015)
DNA (1104bp) protein (368aa)
hisC; Histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=99 Tax=Clostridium difficile RepID=T3GL27_CLODC rbh
NECEvent2014_2_3_scaffold_243_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20118..21548)
DNA (1431bp) protein (477aa)
Lactose permease n=173 Tax=Clostridium difficile RepID=C9XL03_CLODC rbh
lactose permease
Lactose permease {ECO:0000313|EMBL:CBE05172.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (st
Displaying 18 items

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