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NECEvent2014_2_3_scaffold_342

Alias: 172_003_scaffold_342

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_342_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(179..832)
DNA (654bp) protein (218aa)
Bacterial regulatory s, gntR family protein n=80 Tax=Clostridium difficile RepID=T3I245_CLODC rbh
Transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAJ67720.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_342_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1077..2942)
DNA (1866bp) protein (622aa)
Putative alpha-amylase {ECO:0000313|EMBL:CAJ67719.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAJ67719.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
putative alpha-amylase (EC:3.2.1.-)
Alpha amylase, catalytic domain protein n=107 Tax=Clostridium difficile RepID=T3I3X7_CLODC rbh
NECEvent2014_2_3_scaffold_342_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2947..5388)
DNA (2442bp) protein (814aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
glgP; Glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=22 Tax=Clostridium difficile RepID=Q18A78_CLOD6 rbh
NECEvent2014_2_3_scaffold_342_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5381..6823)
DNA (1443bp) protein (481aa)
glgA; Glycogen synthase (Starch [bacterial glycogen]synthase) (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1215067 species="Bact
Glycogen synthase n=31 Tax=Clostridium difficile RepID=GLGA_CLOD6 rbh
NECEvent2014_2_3_scaffold_342_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6852..7982)
DNA (1131bp) protein (377aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=172 Tax=Clostridium difficile RepID=T3I0X7_CLODC rbh
glgD; Glycogen biosynthesis protein
Glycogen biosynthesis protein {ECO:0000313|EMBL:CCL00833.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_342_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7984..9144)
DNA (1161bp) protein (387aa)
glgC; Glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyr
Glucose-1-phosphate adenylyltransferase n=202 Tax=Clostridium difficile RepID=GLGC_CLOD6 rbh
NECEvent2014_2_3_scaffold_342_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9164..9328)
DNA (165bp) protein (55aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS84827.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_342_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9915..10958)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=171 Tax=Clostridium difficile RepID=Q18A72_CLOD6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28918.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_342_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10979..11425)
DNA (447bp) protein (149aa)
NfeD-like, partner-binding family protein n=165 Tax=Clostridium difficile RepID=T3I5Y1_CLODC
hypothetical protein
Putative protease {ECO:0000313|EMBL:CAJ67713.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (s
NECEvent2014_2_3_scaffold_342_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11597..13177)
DNA (1581bp) protein (527aa)
Phosphomethylpyrimidine kinase family protein n=116 Tax=Clostridium difficile RepID=T2TPQ4_CLODI rbh
Phosphomethylpyrimidine kinase family protein {ECO:0000313|EMBL:EQG78157.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
carbohydrate kinase
NECEvent2014_2_3_scaffold_342_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13976..14062
DNA (87bp) protein (29aa)
Branched-chain amino acid transport system / permease component family protein n=1 Tax=Clostridium difficile P9 RepID=T4K2J5_CLODI
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:EQG78284.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcac
ABC transporter permease; K05832 putative ABC transport system permease protein
Displaying 11 items

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