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NECEvent2014_2_3_scaffold_346

Alias: 172_003_scaffold_346

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_346_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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428..2521
DNA (2094bp) protein (698aa)
pdcA; diguanylate kinase signaling protein (EC:2.7.7.65)
Diguanylate kinase signaling protein {ECO:0000313|EMBL:CAJ68380.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CAJ68380.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
Diguanylate cyclase domain protein n=37 Tax=Clostridium difficile RepID=T2TKB9_CLODI rbh
NECEvent2014_2_3_scaffold_346_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3903..4175)
DNA (273bp) protein (91aa)
Uncharacterized protein n=146 Tax=Clostridium difficile RepID=T3HE99_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29664.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_346_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4394..5212
DNA (819bp) protein (273aa)
MerR regulatory family protein n=109 Tax=Clostridium difficile RepID=C9XMI6_CLODC rbh
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL29665.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_346_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5345..7465)
DNA (2121bp) protein (707aa)
Ferrous iron transport protein B n=152 Tax=Clostridium difficile RepID=C9XMI7_CLODC rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:CAJ68382.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
feoB2; ferrous ion transport protein
NECEvent2014_2_3_scaffold_346_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7491..7718)
DNA (228bp) protein (76aa)
FeoA domain protein n=222 Tax=Clostridium difficile RepID=C9XMI8_CLODC
feoA2; ferrous ion transport protein
FeoA domain protein {ECO:0000313|EMBL:EQG76678.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_346_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8045..8485)
DNA (441bp) protein (147aa)
Acetyltransferase family protein n=150 Tax=Clostridium difficile RepID=T3HBU9_CLODC
putative acyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:EQG75459.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_346_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8637..9626
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=G6BXH2_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE03874.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_346_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10103..11311
DNA (1209bp) protein (403aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) {ECO:0000313|EMBL:CAJ68386.1}; EC=6.1.1.1 {ECO:0000313|EMBL:CAJ68386.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Tyrosine--tRNA ligase n=170 Tax=Clostridium difficile RepID=C9XP46_CLODC rbh
NECEvent2014_2_3_scaffold_346_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11372..12253)
DNA (882bp) protein (294aa)
Polysaccharide deacetylase family protein n=167 Tax=Clostridium difficile RepID=T3HDY0_CLODC rbh
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EQI00353.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_346_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12669..13583
DNA (915bp) protein (305aa)
EamA-like transporter family protein n=43 Tax=Clostridium difficile RepID=T2UUZ0_CLODI rbh
hypothetical protein
EamA-like transporter family protein {ECO:0000313|EMBL:EQE72242.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_346_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13806..13910
DNA (105bp) protein (35aa)
Reverse rubrerythrin-1 n=1 Tax=Clostridium difficile DA00273 RepID=T3XYF1_CLODI
ruberythrin
Putative rubrerythrin {ECO:0000313|EMBL:CAJ68389.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
Displaying 11 items

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