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NECEvent2014_2_3_scaffold_401

Alias: 172_003_scaffold_401

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_401_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..613)
DNA (612bp) protein (204aa)
ABC-type transport system, multidrug-family permease n=124 Tax=Clostridium difficile RepID=Q186W2_CLOD6 rbh
ABC-type transport system, multidrug-familypermease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CAJ68622.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_401_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(610..1455)
DNA (846bp) protein (282aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ68621.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ68621.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostr
Fluoroquinolones export ATP-binding protein n=82 Tax=Clostridium difficile RepID=T3GY71_CLODC rbh
NECEvent2014_2_3_scaffold_401_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1569..2159)
DNA (591bp) protein (197aa)
Bacterial regulatory s, tetR family protein n=138 Tax=Clostridium difficile RepID=T3GTK8_CLODC rbh
intron RNA domain IV
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQE65276.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_401_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2448..2681
DNA (234bp) protein (78aa)
Uncharacterized protein n=210 Tax=Clostridium difficile RepID=F3Y5U3_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA62835.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_401_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2912..5299)
DNA (2388bp) protein (796aa)
Cwp13 n=44 Tax=Clostridium difficile RepID=L7PEV1_CLODI rbh
cwp13; putative cell wall binding protein cwp13
Putative cell wall binding protein cwp13 {ECO:0000313|EMBL:CAJ68619.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_3_scaffold_401_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5491..6246)
DNA (756bp) protein (252aa)
Putative CoA-substrate-specific enzyme activase domain protein n=130 Tax=Clostridium difficile RepID=T3GUD0_CLODC rbh
putative CoA enzyme activase
Putative CoA enzyme activase {ECO:0000313|EMBL:CAJ68618.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_401_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6271..7422)
DNA (1152bp) protein (384aa)
putative 2-hydroxyacyl-CoA dehydratase (EC:4.2.1.-)
2-hydroxyacyl-CoA dehydratase {ECO:0000313|EMBL:CKH11858.1}; EC=1.3.7.8 {ECO:0000313|EMBL:CKH11858.1};; Putative 2-hydroxyacyl-CoA dehydratase {ECO:0000313|EMBL:CEJ98352.1}; EC=4.2.1.- {ECO:0000313|EM
2-hydroxyglutaryl-CoA dehydratase, D-component family protein n=157 Tax=Clostridium difficile RepID=T3GVZ5_CLODC rbh
NECEvent2014_2_3_scaffold_401_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7638..8378)
DNA (741bp) protein (247aa)
EcsC family protein n=184 Tax=Clostridium difficile RepID=C9XR23_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29954.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_401_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8450..9439)
DNA (990bp) protein (330aa)
add; Adenosine deaminase (Adenosine aminohydrolase) (EC:3.5.4.4)
Adenosine deaminase (Adenosine aminohydrolase) {ECO:0000313|EMBL:CAJ68615.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CAJ68615.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
Adenosine deaminase n=130 Tax=Clostridium difficile RepID=T3GZH6_CLODC rbh
NECEvent2014_2_3_scaffold_401_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9699..10952
DNA (1254bp) protein (418aa)
Sodium/glutamate symporter n=26 Tax=Clostridium difficile RepID=Q186V2_CLOD6 rbh
gltC; sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:CEJ98349.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_401_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11049..11228
DNA (180bp) protein (60aa)
Ferrous iron transport protein n=217 Tax=Clostridium difficile RepID=Q186V3_CLOD6
ferrous iron transport protein A
Ferrous iron transport protein {ECO:0000313|EMBL:CDS87537.1}; Ferrous iron transport protein A {ECO:0000313|EMBL:CKH11750.1}; Putative ferrous iron transport protein A {ECO:0000313|EMBL:CDS84177.1}; T
Displaying 11 items

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