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NECEvent2014_2_3_scaffold_442

Alias: 172_003_scaffold_442

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_442_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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542..1747
DNA (1206bp) protein (402aa)
putative glycosyl transferase (EC:2.4.1.-)
Monogalactosyldiacylglycerol (MGDG) synthase family protein n=164 Tax=Clostridium difficile RepID=T3IR91_CLODC rbh
Monogalactosyldiacylglycerol synthase protein {ECO:0000313|EMBL:EHJ33647.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_442_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1818..2039)
DNA (222bp) protein (74aa)
Uncharacterized protein n=217 Tax=Clostridium difficile RepID=T3IQ01_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL32320.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_442_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2180..2779)
DNA (600bp) protein (200aa)
Recombination protein RecR n=210 Tax=Clostridium difficile RepID=RECR_CLOD6 rbh
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_442_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2792..3172)
DNA (381bp) protein (127aa)
Nucleoid-associated protein CD630_00170 n=218 Tax=Clostridium difficile RepID=Y017_CLOD6
Nucleoid-associated protein HMPREF0219_0777 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=
hypothetical protein
NECEvent2014_2_3_scaffold_442_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3201..4838)
DNA (1638bp) protein (546aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CCL32317.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CCL32317.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrepto
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=164 Tax=Clostridium difficile RepID=T3IMU5_CLODC rbh
NECEvent2014_2_3_scaffold_442_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5109..5294)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS85213.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_442_trna_1
unknown

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comp(5220..5308)
DNA (89bp)
transferRNA
NECEvent2014_2_3_scaffold_442_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5309..5764)
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=185 Tax=Clostridium difficile RepID=C9XIC7_CLODC rbh
cytosine/adenosine deaminase
NECEvent2014_2_3_scaffold_442_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6085..7356)
DNA (1272bp) protein (424aa)
serS1; seryl-tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=172 Tax=Clostridium difficile RepID=Q18C97_CLOD6 rbh
NECEvent2014_2_3_scaffold_442_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7815..8696)
DNA (882bp) protein (294aa)
Mechanosensitive ion channel family protein n=6 Tax=Clostridium difficile RepID=T3ILB6_CLODC rbh
putative mechanosensitive ion channel protein
Putative mechanosensitive ion channel protein {ECO:0000313|EMBL:CEJ96514.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_442_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8708..9217)
DNA (510bp) protein (170aa)
HTH domain protein n=116 Tax=Clostridium difficile RepID=T3IMZ2_CLODC rbh
putative small-molecule-binding protein
Putative small-molecule-binding protein {ECO:0000313|EMBL:CEJ96513.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
Displaying 11 items

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