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NECEvent2014_2_3_scaffold_621

Alias: 172_003_scaffold_621

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_621_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..87)
DNA (87bp) protein (29aa)
NMT1-like family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A684_CLODI
hypothetical protein
Putative binding protein ytlA {ECO:0000313|EMBL:CCK90578.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_621_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(135..1721)
DNA (1587bp) protein (529aa)
Site-specific recombinase n=8 Tax=Clostridium difficile RepID=U4C0R6_CLODI rbh
Site-specific recombinase {ECO:0000313|EMBL:CKH15279.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
Site-specific recombinase
NECEvent2014_2_3_scaffold_621_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1840..2694)
DNA (855bp) protein (285aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=46 Tax=Clostridium difficile RepID=T3GR77_CLODC rbh
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH15303.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEJ98456.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_3_scaffold_621_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3079..3360
DNA (282bp) protein (94aa)
Uncharacterized protein n=89 Tax=Clostridium difficile RepID=T3GRW8_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG76971.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_621_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3507..4355
DNA (849bp) protein (283aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B8J5_CLODI rbh
putative acetylesterase
Acetylxylan esterase-like protein {ECO:0000313|EMBL:CKH15357.1}; Putative acetylesterase {ECO:0000313|EMBL:CEJ98458.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
NECEvent2014_2_3_scaffold_621_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4407..4928
DNA (522bp) protein (174aa)
Transcriptional regulator PadR-like family protein n=34 Tax=Clostridium difficile RepID=T3GMU3_CLODC rbh
Transcriptional regulator, PadR family
PadR-like family transcriptional regulator {ECO:0000313|EMBL:CKH15367.1}; Transcriptional regulator, PadR family {ECO:0000313|EMBL:CEJ98459.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Cl
Displaying 6 items

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