ggKbase home page

NECEvent2014_2_3_scaffold_621_2

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(135..1721)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase n=8 Tax=Clostridium difficile RepID=U4C0R6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 521.0
  • Bit_score: 1045
  • Evalue 0.0
  • rbh
Site-specific recombinase {ECO:0000313|EMBL:CKH15279.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 521.0
  • Bit_score: 1047
  • Evalue 0.0
Site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 501.0
  • Bit_score: 1004
  • Evalue 1.20e-290

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1587
TTGTATTTTGAAGGTTTATTTTTGTGTTTTAAATATAATCAATCTGTTACTGAATATAATATATTCAAGGGGTGTGATTTAATGAATGTGGCAATTTATTTACGCAAAAGCAGAGCTGATGAAGAAGCAGAACATAGAGGTGAATTTGAAACTCTAAGTAGACATAAGACAACTCTTTTAAAACTAGCAAGAGAACAAAATTTAAATGTCATTGAAATTAAAGAAGAACTTGTTTCTGGGGAAAGTATAGAATATAGACCTAAGATGCTAGAATTACTAGGTGAAATTAAAAATAATAACTATGATGCTGTTTTAGTGATGGATATTGACCGTTTGGGTCGTGGTAATATGCAAGACCAAGGGTTAATACTAGATACATTTAAAAAATCTAAAACGAAAATTATTACTCCTAGAAAAACGTATGATTTAAATGATGAGTTTGATGAGGAGTATTCTGAATTTGAAGCTTTTATGGCTCGTAAGGAATTAAAATTAATATCTAGACGTATGCAAAGAGGAAAAATCAAAAGTATTGAAGAGGGTAAATTTATAGCTCAAGCTCCTCCTTATGGGTATGATATTAAATATTTAAATAATAAAGAAAGAGTACTTGTAATAAATGAAGATAAAGCAACTGTTGTTAAAATAATCTTTGATATGTATTTAAAAGGAGATGGTGCATGTAAAATATCCAATTATTTAAACGAACTTGGTTATAAGACCACAACAGGTAGAACTTGGTATGAAAAGGGTATAAGAGATATTATAAAAAACAAAGTGTATTGTGGATATATAGTATGGAATAAAGTCGAGAGGAAAAGAAATTCTAGTAGAACAAGAGGAATTGAGGAACAAATTGAGGTAAAAGGAAAGCATGAACCAATAATAAGTGAAGACATATGGAATAAGGCACAAAATATAAGAAAAAAACGTATTAATTCCCCTACTCCAAACAATAAAATAACAAATCCATTGGCTGGAATTGTAAAATGTGGATACTGTAATCATACTTTAATAGCCAAATCTAATACTACATCAAATGGATATGAGAAATATATGGTTTGTACTAATTGTAAAAATAAAGCTACTAAACTATACATATTAGAAAATAAAATATTAGAGGTCTTAAATAAATGGTTAGTAAATTATAGACTATCTTTAAAAGATGAAAAAGATAACTCTAAACCTGAAAATACTTTAGAACATACCTTGACAAATTTAAATAAAGAATTGGATACTTTAGAAAAACAAAAAGAACGACTACATGATTTTTTAGAACAAGGAATTTATGACAATAATACATTTGGGGAACGTTTAAAAATACTCTTATCTCGTATAGAAAATGCAAGAGAAGCTATTAATAAAACAAATATAGATATTGAAATGCAAAAGGAAAGAAATACAGTTAAAACACAAATTGTTCCTCAACTTGAAAAAATTTTAAGTGAATATACAGAGGAGAAAGAACCTTATCTAAAAAATATATTGCTTAAAAGTGTAATAAATTATGCAGTCTATAAAAAAGAACCTAATCAAAAATCTGATGATTTTTCTTTAATACTTTACCCTAATATCCCAAGAGATTAA
PROTEIN sequence
Length: 529
LYFEGLFLCFKYNQSVTEYNIFKGCDLMNVAIYLRKSRADEEAEHRGEFETLSRHKTTLLKLAREQNLNVIEIKEELVSGESIEYRPKMLELLGEIKNNNYDAVLVMDIDRLGRGNMQDQGLILDTFKKSKTKIITPRKTYDLNDEFDEEYSEFEAFMARKELKLISRRMQRGKIKSIEEGKFIAQAPPYGYDIKYLNNKERVLVINEDKATVVKIIFDMYLKGDGACKISNYLNELGYKTTTGRTWYEKGIRDIIKNKVYCGYIVWNKVERKRNSSRTRGIEEQIEVKGKHEPIISEDIWNKAQNIRKKRINSPTPNNKITNPLAGIVKCGYCNHTLIAKSNTTSNGYEKYMVCTNCKNKATKLYILENKILEVLNKWLVNYRLSLKDEKDNSKPENTLEHTLTNLNKELDTLEKQKERLHDFLEQGIYDNNTFGERLKILLSRIENAREAINKTNIDIEMQKERNTVKTQIVPQLEKILSEYTEEKEPYLKNILLKSVINYAVYKKEPNQKSDDFSLILYPNIPRD*