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NECEvent2014_2_3_scaffold_14_2

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 473..1378

Top 3 Functional Annotations

Value Algorithm Source
truB; transfer RNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 606
  • Evalue 4.30e-171
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 606
  • Evalue 2.10e-170
tRNA pseudouridine synthase B n=184 Tax=Clostridium difficile RepID=TRUB_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 606
  • Evalue 1.50e-170
  • rbh

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 906
ATGAATAAGATTATAAGTATATTGAAACCCACAGGTATGACATCTCATGATGTTGTAAGTAGAGTGAGAAAGATTTTAAATATAAAAAAAGTTGGTCATACAGGTACTCTTGACCCAGATGCTTCAGGTGTTTTACCAATCTGTATAGGGAAAGCTACAAAAGTATGTGAAGTTATTTTAAACAAAGATAAATCGTATATATGTGAGCTTACTTTAGGTATAAGTACAGATACTTATGATGCTTCAGGTGAAATTTTAAAAAAAGTTGATGATTTTAAATTTAGTAATGAAGACATAGAAAGAGCTTTTGACACACAAAGAGGAGAGATAAATCAACTTCCTCCAATTTATTCAGCTTTAAAGGTAAATGGAAAGAGAATGTGTGATTTAGTAAGAAGTGGTAGACAATCTGAAATTACTTTAAAAACAAGAAGAGTAAATATAAAAGACATAAAAATACTAAGTATAAAAGGTAATAAAGTAATGTTTTATGTTGAGTGTTCTAAAGGGACTTATGTGAGAAGCATTTGCCATGATATAGGAGAATATCTAGGTTGTGGAGCTCATATGTCGTTTTTGAATAGAACATCTTCTGGTAAATTTGACTTAGATAATTCAATAACATTAGAAGAATTAGAATTATTTTATGAAAATAAAACTTTAGACAAATACTTATATGATATAGATTATGTCCTTGATTCGTTTAATTATGTTGTATTAAACCCTAATGCTATAAAATATTATAGTAATGGTGGCTCAATAGATGATAAAAGGTTTTTAAAAAATAATTTCGATAAAGATGATGAATTTGTAAGAGTATACAGTACAGATAATTTCTTAGGATTAGGAAAATTATCAAAACACAATAATACAATAAGTGTTAAAAGTGATAAGATGTTCATATAA
PROTEIN sequence
Length: 302
MNKIISILKPTGMTSHDVVSRVRKILNIKKVGHTGTLDPDASGVLPICIGKATKVCEVILNKDKSYICELTLGISTDTYDASGEILKKVDDFKFSNEDIERAFDTQRGEINQLPPIYSALKVNGKRMCDLVRSGRQSEITLKTRRVNIKDIKILSIKGNKVMFYVECSKGTYVRSICHDIGEYLGCGAHMSFLNRTSSGKFDLDNSITLEELELFYENKTLDKYLYDIDYVLDSFNYVVLNPNAIKYYSNGGSIDDKRFLKNNFDKDDEFVRVYSTDNFLGLGKLSKHNNTISVKSDKMFI*