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NECEvent2014_2_3_scaffold_14_25

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 28945..29697

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=101 Tax=Clostridium difficile RepID=C9XPJ9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 250.0
  • Bit_score: 492
  • Evalue 2.70e-136
  • rbh
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 250.0
  • Bit_score: 492
  • Evalue 7.50e-137
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CAJ68195.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 250.0
  • Bit_score: 492
  • Evalue 3.70e-136

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 753
ATGAACCTAATAGACAAATTAGATATAAATCAAAAAAAATTATCTACAAATGAAATATCTCTTTTAAACTATTTTCTAAAAAATTCTGAAAAAATAAATCAAAAAAAGATTAAAGATATAGCAAATGAAACTTTTAATTCGACTGCATACATAGTAAGGTTTTGTCAGAAGCTCGGCTTTTCTGGATATAGTGAATTTAAAAACTTTTTAGTTTTTTCATATTCAAATAGAAATGAAAGAAATAAGGAGTTTACTAAAAGTCAAAGTGATATTTTTACTGATGTTATGGATACACGAAATTTAATAAATGTAGAGAATATAGATATGTGTTTAAATGAAATACATAATTCTAAGCATATATATTTTTTTGGTGTTGGGTCTTCTAGATTAGTATGTACTGAAATGTCTCAACGTTTTTCAGCTATAGGTGTAAATGTAAAATACTATGATGATTCAACTCTCATGTATTTGGCTGCATCAAATATTACTAAAGATGACCTTGTAATTGCTGTATCTATGTCTGGAGAGACTGCTCAAGTTATTAAGGCATGTAATATAGCAAAAACAAATCAAGTTAAAGTAATTTCTCTGACAAATATAAGTGTCAATTCATTATCAAATATAGCTGATATAAAATTATTTGTATCTTCTCCACAATATAATTTTAATAGTGTTAACTATACGTCTAGAGTGCCAGCACTTTCTCTTATGGAATATATGTTTCATAAATACATTGAAAAATACAATAGATGA
PROTEIN sequence
Length: 251
MNLIDKLDINQKKLSTNEISLLNYFLKNSEKINQKKIKDIANETFNSTAYIVRFCQKLGFSGYSEFKNFLVFSYSNRNERNKEFTKSQSDIFTDVMDTRNLINVENIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFSAIGVNVKYYDDSTLMYLAASNITKDDLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIADIKLFVSSPQYNFNSVNYTSRVPALSLMEYMFHKYIEKYNR*