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NECEvent2014_2_3_scaffold_22_5

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 4913..5638

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=22 Tax=Clostridium difficile RepID=T3G089_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 477
  • Evalue 6.60e-132
  • rbh
Transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 477
  • Evalue 1.80e-132
GntR family transcriptional regulator {ECO:0000313|EMBL:CKG73179.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDS89762.1}; UbiC transcription regulator-associated domain protein {ECO:0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 477
  • Evalue 9.20e-132

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGATAAAAAGAAATGATAAAAGACCAATATATGACCAGCTTGTTGAGATATTAAGAACTAAGATTGAAAATGAGATGGAACCAAACGATAGAATGCTTTCCGAAAGAAAAATTTGTGATGAATATGGAGTAAGTAGAACCACAGTTAGACTAGCTATGGCTGAGTTGGAACATATGGGATATATATACAAAAGACATGGAAAAGGAACTTTTGTTGCTGCACTAAGTCAAAATTCTCAAAACTTAATGGAAAGTTATAGTTTTACAGATTATATGAGAACACAAGGAAAAAAGCCAGGTACAAAGGTATTATCATTTGAGGTAGTAGAAAGTACAAAGTATTTCTCTGAAAAATTAGGTATAACTACTGGTGAAAAAATGATAAAAATAATGCGTTTAAGACTTGCTGATGACCTTCCTATGATGCTTGAAAGAACATATCTTCCTATGAAAGAATTTATAGGATTGACAAAAGAAAAAATCGAACAAAAACCTTTATATGAAATATTTAGAGAAGATTATGGCGAGATTATTAAAGTCGCTGATGAAGAATTTTCAGCTGGAATAATCTCTGATAAGGAAGCTAAGTTATTGGAAGTACCAGGAGATTCACCTTGTCTGAAATTACTTCGTACCACATATAATGATGACAATATAGTTATTGAATTTACTTTGAGTGTCGCTAGAAGCGATAAATTTGTATATAGAGTAAGACATGTAAGATAG
PROTEIN sequence
Length: 242
MIKRNDKRPIYDQLVEILRTKIENEMEPNDRMLSERKICDEYGVSRTTVRLAMAELEHMGYIYKRHGKGTFVAALSQNSQNLMESYSFTDYMRTQGKKPGTKVLSFEVVESTKYFSEKLGITTGEKMIKIMRLRLADDLPMMLERTYLPMKEFIGLTKEKIEQKPLYEIFREDYGEIIKVADEEFSAGIISDKEAKLLEVPGDSPCLKLLRTTYNDDNIVIEFTLSVARSDKFVYRVRHVR*