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NECEvent2014_2_3_scaffold_22

Alias: 172_003_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_22_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(144..995)
DNA (852bp) protein (284aa)
putative ketose-bisphophate aldolase class II;putative tagatose-bisphosphate aldolase GatY (EC:4.1.2.-)
Putative ketose-bisphophate aldolase class II putative tagatose-bisphosphate aldolase GatY {ECO:0000313|EMBL:CDS89758.1}; EC=4.1.2.- {ECO:0000313|EMBL:CDS89758.1};; Putative ketose-bisphophate aldolas
Ketose-bisphosphate aldolase family protein n=129 Tax=Clostridium difficile RepID=T3G481_CLODC rbh
NECEvent2014_2_3_scaffold_22_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1044..2207)
DNA (1164bp) protein (388aa)
putative phosphosugar isomerase; putativetagatose-6-phosphate ketose/aldose isomerase AgaS (EC:5.-.-.-)
SIS domain protein n=103 Tax=Clostridium difficile RepID=T3G572_CLODC rbh
SIS domain protein {ECO:0000313|EMBL:EQE58943.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_22_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2675..3592
DNA (918bp) protein (306aa)
Oxidoreductase , NAD-binding Rossmann fold family protein n=9 Tax=Clostridium difficile RepID=T3G2W2_CLODC rbh
putative oxidoreductase with NAD(P)-bindingRossmann-fold domain
Oxidoreductase {ECO:0000313|EMBL:CKG73228.1}; Putative oxidoreductase with NAD(P)-bindingRossmann-fold domain {ECO:0000313|EMBL:CEK00161.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clost
NECEvent2014_2_3_scaffold_22_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3715..4644)
DNA (930bp) protein (310aa)
putative carbohydrate/purine kinase; putativetagatose-6-phosphate kinase LacC (EC:2.7.1.-)
Putative carbohydrate/purine kinase putative tagatose-6-phosphate kinase LacC {ECO:0000313|EMBL:CAJ70354.1}; EC=2.7.1.- {ECO:0000313|EMBL:CAJ70354.1};; TaxID=272563 species="Bacteria; Firmicutes; Clos
Tagatose-6-phosphate kinase n=8 Tax=Clostridium difficile RepID=T3G150_CLODC rbh
NECEvent2014_2_3_scaffold_22_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4913..5638
DNA (726bp) protein (242aa)
Bacterial regulatory s, gntR family protein n=22 Tax=Clostridium difficile RepID=T3G089_CLODC rbh
Transcriptional regulator, GntR family
GntR family transcriptional regulator {ECO:0000313|EMBL:CKG73179.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDS89762.1}; UbiC transcription regulator-associated domain protein {ECO:0
NECEvent2014_2_3_scaffold_22_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5721..6875
DNA (1155bp) protein (385aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1496 species="B
N-acetylglucosamine-6-phosphate deacetylase n=9 Tax=Clostridium difficile RepID=T3G486_CLODC rbh
NECEvent2014_2_3_scaffold_22_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7441..7584)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=F3Y606_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEK00166.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_22_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7574..8056)
DNA (483bp) protein (161aa)
YbaK / prolyl-tRNA synthetases associated domain protein n=6 Tax=Clostridium difficile RepID=T2TT12_CLODI rbh
putative nucleotide-binding protein
Putative nucleotide-binding protein {ECO:0000313|EMBL:CEK00167.1}; YbaK/prolyl-tRNA synthetase associated domain-containing protein {ECO:0000313|EMBL:CKG73119.1}; TaxID=1496 species="Bacteria; Firmicu
NECEvent2014_2_3_scaffold_22_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8660..9808)
DNA (1149bp) protein (383aa)
Putative carboxy-terminal protease {ECO:0000313|EMBL:CAJ70358.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CAJ70358.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
C-terminal processing peptidase family protein n=124 Tax=Clostridium difficile RepID=T3G2V1_CLODC rbh
exported carboxy-terminal processing protease
NECEvent2014_2_3_scaffold_22_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9971..10540
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
5-formyltetrahydrofolate cyclo-ligase n=75 Tax=Clostridium difficile RepID=T3G139_CLODC rbh
NECEvent2014_2_3_scaffold_22_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10722..11156)
DNA (435bp) protein (145aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=G6B3G5_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34048.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_22_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11364..12458)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=G6BVF8_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE07268.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_22_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12881..13822)
DNA (942bp) protein (314aa)
tkt2; Transketolase, pyridine binding subunit (EC:2.2.1.1)
Transketolase%2C pyridine binding subunit {ECO:0000313|EMBL:CKG72960.1}; EC=2.2.1.7 {ECO:0000313|EMBL:CKG72960.1};; Transketolase, pyridine binding subunit {ECO:0000313|EMBL:CEK00172.1}; EC=2.2.1.1 {E
Transketolase, pyrimidine binding domain protein n=61 Tax=Clostridium difficile RepID=T3G450_CLODC rbh
NECEvent2014_2_3_scaffold_22_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13815..14642)
DNA (828bp) protein (276aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=204 Tax=Clostridium difficile RepID=C9XS63_CLODC rbh
tkt; transketolase, thiamine disphosphate-binding subunit
Transketolase, thiamine disphosphate-binding subunit {ECO:0000313|EMBL:CBE07272.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_22_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14813..15205)
DNA (393bp) protein (131aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
mRNA interferase n=2 Tax=Clostridium difficile RepID=T2T8L9_CLODI
regulator of cell growth
NECEvent2014_2_3_scaffold_22_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15165..15452)
DNA (288bp) protein (96aa)
CopG-family transcriptional regulator n=219 Tax=Clostridium difficile RepID=C9XS65_CLODC
CopG family transcriptional regulator
Putative antitoxin EndoAI {ECO:0000313|EMBL:CCL31701.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_22_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15485..16642)
DNA (1158bp) protein (386aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1496 species="Bacteria; Firmicute
Alanine racemase n=155 Tax=Clostridium difficile RepID=C9XS66_CLODC rbh
alanine racemase
NECEvent2014_2_3_scaffold_22_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16657..17247)
DNA (591bp) protein (197aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=Q180W3_CLOD6 rbh
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EQG73564.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_22_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17268..17729)
DNA (462bp) protein (154aa)
CBS domain protein n=218 Tax=Clostridium difficile RepID=C9XS68_CLODC
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:EQG73602.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_22_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17744..18124)
DNA (381bp) protein (127aa)
acpS; Holo-[acyl-carrier-protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|SAAS:SAAS00237208}; EC=2.7.8.7 {ECO:0000256|SAAS:SAAS00237180};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
Holo-[acyl-carrier-protein] synthase n=70 Tax=Clostridium difficile RepID=T3G2U1_CLODC
NECEvent2014_2_3_scaffold_22_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18586..18846)
DNA (261bp) protein (87aa)
ATP synthase F1, epsilon subunit {ECO:0000313|EMBL:EQE58901.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EQE58901.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcacea
ATP synthase F1, epsilon subunit n=198 Tax=Clostridium difficile RepID=C9XS70_CLODC
atpC; ATP synthase subunit epsilon
NECEvent2014_2_3_scaffold_22_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18849..20243)
DNA (1395bp) protein (465aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=202 Tax=Clostridium difficile RepID=ATPB_CLOD6 rbh
NECEvent2014_2_3_scaffold_22_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20256..21134)
DNA (879bp) protein (293aa)
ATP synthase gamma chain n=178 Tax=Clostridium difficile RepID=T3G509_CLODC rbh
F0F1 ATP synthase subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1215
NECEvent2014_2_3_scaffold_22_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21162..22664)
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=218 Tax=Clostridium difficile RepID=ATPA_CLOD6 rbh
ATP synthase subunit alpha
NECEvent2014_2_3_scaffold_22_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22681..23226)
DNA (546bp) protein (182aa)
ATP synthase subunit delta n=214 Tax=Clostridium difficile RepID=ATPD_CLOD6 rbh
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
NECEvent2014_2_3_scaffold_22_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23223..23720)
DNA (498bp) protein (166aa)
ATP synthase subunit b n=178 Tax=Clostridium difficile RepID=ATPF_CLOD6 rbh
ATP synthase subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
NECEvent2014_2_3_scaffold_22_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23843..24103)
DNA (261bp) protein (87aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit c n=220 Tax=Clostridium difficile RepID=ATPL_CLOD6
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_22_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24172..24876)
DNA (705bp) protein (235aa)
ATP synthase subunit a n=194 Tax=Clostridium difficile RepID=C9XS77_CLODC rbh
ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
NECEvent2014_2_3_scaffold_22_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24879..25265)
DNA (387bp) protein (129aa)
atpI2; ATP synthase protein I (ATP synthase F0 sectorsubunit I) (EC:3.6.3.14)
ATP synthase protein I {ECO:0000313|EMBL:CKG72456.1}; ATP synthase protein I (ATP synthase F0 sector subunit I) {ECO:0000313|EMBL:CDS89793.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CDS89793.1};; ATP synthase
ATP synthase I chain family protein n=182 Tax=Clostridium difficile RepID=T3G2R2_CLODC
NECEvent2014_2_3_scaffold_22_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25270..25497)
DNA (228bp) protein (76aa)
F0F1-ATPase subunit family protein n=199 Tax=Clostridium difficile RepID=C9XS79_CLODC
ATP synthase protein
ATP synthase transporter protein AtpZ {ECO:0000313|EMBL:CCK88824.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
Displaying items 1-30 of 108 in total

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