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NECEvent2014_2_3_scaffold_34_94

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(90108..90464)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator hxlR n=141 Tax=Clostridium difficile RepID=T3GL31_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 245
  • Evalue 3.50e-62
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 245
  • Evalue 9.90e-63
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EHJ27230.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 245
  • Evalue 4.90e-62

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGGATATAGATAATAATTTTGAAGAATTTCCAAATATTGAAGAAAGACAAAAAGATTTTAATTGTTCAATTGGTTTTACCATGACTGTGATAGGAAGTAAATGGAGGGCAATTATTTTATGGCATATTTTAAAACAAGAGCCAATACGTTACAGTCAATTAAAAAAAGAAGTTGTTCATATAAGTCATAAGATACTGTCACAAGAATTAAAGTATCTTGAAAGAGATGGACTTATTAAGAGGATTTCTTATCCGACTATTCCTCCAAAAGTTGAATATTTGTCTACTAAACGTGGTAAATCATTAGAATCTATATTATTAGAATTATGTAATTGGGGTAAACAGTATATGAGATAA
PROTEIN sequence
Length: 119
MDIDNNFEEFPNIEERQKDFNCSIGFTMTVIGSKWRAIILWHILKQEPIRYSQLKKEVVHISHKILSQELKYLERDGLIKRISYPTIPPKVEYLSTKRGKSLESILLELCNWGKQYMR*