ggKbase home page

NECEvent2014_2_3_scaffold_36_7

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 9091..9924

Top 3 Functional Annotations

Value Algorithm Source
PRD domain protein n=70 Tax=Clostridium difficile RepID=T3GA12_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 277.0
  • Bit_score: 550
  • Evalue 7.00e-154
  • rbh
bglG4; Transcription antiterminator, PTS operonregulator, bglG4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 277.0
  • Bit_score: 550
  • Evalue 2.00e-154
PRD domain protein {ECO:0000313|EMBL:EQE59809.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 277.0
  • Bit_score: 550
  • Evalue 9.80e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 834
ATGGTTATAAAGAAAGTATTTAATAATAATGTTGTATTTGCCAGAGATAATTCAGGACAAGAAGTAATATTAATGGGAAAAGGAATTGGATTTAATAAATTTACTAAAGATTTAGTTGAAATAGATAAAATTGAAAAGAAATTTATATTCAATAATGAGGAATCATTAAGTGAATTACATTCACTACTAGATAGGATACCTTTAAAAGATGTTGAGCTTGTAAGTGAAATTATTCAAATGGGAAGAGAAGAATTGGGTGATAATCTTAATGATAGTATATTAATCACATTATCAGAACATATAAGTTATATGTTAAAAAGAATGGATGAAGGATTAGTATTTCAAAGCCCGCTTCAATGGGAAATAAGACAAATATATCCTAATGAATATAATTTTAGTAAGAAAGCTGTAGAATATTTAAGAAAAAAATTAGATAAAAATATTCCTGATTCTGAAATAGCATTTATTACGATACACTTTGCAAATGCTCAGTTAGAAACAAAAGATATGCAAGAAACTTTATTGTTAACTAAGATAATTGATAATGTATTAGATATCATAAAGTATCACTATGGAATCGAAATAAATGAATATTCCTTTGACTACACAAGGTTTATAAGTCATTTAAGATGTTTTATAAAAAGGCAATTAAGTGGTGAGAATACAAATGTAGACACATCATTGTTAGATATAATAAAAATGAAATATAAAAGTGATTACAATTGTGCAAAAAAAGTAAAAAACTTTCTTGAAAAGACGTATAAATGGAAAATTAGCGAAAATGAATTGTTGTACTTAACATTGCATTTAAATAGATTATCAAATATAAAGTAA
PROTEIN sequence
Length: 278
MVIKKVFNNNVVFARDNSGQEVILMGKGIGFNKFTKDLVEIDKIEKKFIFNNEESLSELHSLLDRIPLKDVELVSEIIQMGREELGDNLNDSILITLSEHISYMLKRMDEGLVFQSPLQWEIRQIYPNEYNFSKKAVEYLRKKLDKNIPDSEIAFITIHFANAQLETKDMQETLLLTKIIDNVLDIIKYHYGIEINEYSFDYTRFISHLRCFIKRQLSGENTNVDTSLLDIIKMKYKSDYNCAKKVKNFLEKTYKWKISENELLYLTLHLNRLSNIK*