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NECEvent2014_2_3_scaffold_36

Alias: 172_003_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_36_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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97..3669
DNA (3573bp) protein (1191aa)
Putative serine-aspartate repeat-containing protein SdrF n=2 Tax=Clostridium difficile RepID=Q184Y2_CLOD6 rbh
Putative serine-aspartate repeat-containing protein SdrF {ECO:0000313|EMBL:CAJ70037.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
cbpA; putative serine-aspartate repeat-containingprotein SdrF
NECEvent2014_2_3_scaffold_36_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4431..5393
DNA (963bp) protein (321aa)
Transcriptional regulator family protein n=68 Tax=Clostridium difficile RepID=T3G4M7_CLODC rbh
Transcriptional regulator, DeoR family
Transcriptional regulator family protein {ECO:0000313|EMBL:EQG74417.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
NECEvent2014_2_3_scaffold_36_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5472..6101
DNA (630bp) protein (210aa)
Putative ThiJ/pfpI family protein {ECO:0000313|EMBL:CEJ99785.1}; ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:CKG82670.1}; EC=3.2.-.- {ECO:0000313|EMBL:CKG82670.1};; TaxID=1496 species="Bacte
DJ-1/PfpI family protein n=92 Tax=Clostridium difficile RepID=T3G5G9_CLODC rbh
ThiJ/pfpI family protein
NECEvent2014_2_3_scaffold_36_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6935..7348
DNA (414bp) protein (138aa)
Putative membrane protein n=62 Tax=Clostridium difficile RepID=T3G4T7_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ70034.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_36_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7418..7834
DNA (417bp) protein (139aa)
Uncharacterized protein n=149 Tax=Clostridium difficile RepID=G6BYV5_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:EQG74443.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_36_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7847..8047
DNA (201bp) protein (67aa)
Helix-turn-helix family protein n=183 Tax=Clostridium difficile RepID=T3G4W5_CLODC
transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE59775.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_36_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9091..9924
DNA (834bp) protein (278aa)
PRD domain protein n=70 Tax=Clostridium difficile RepID=T3GA12_CLODC rbh
bglG4; Transcription antiterminator, PTS operonregulator, bglG4
PRD domain protein {ECO:0000313|EMBL:EQE59809.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_36_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10050..11891
DNA (1842bp) protein (614aa)
bglF5; PTS system, beta-glucoside-specific IIABCcomponent, bglF5 (EC:2.7.1.69)
PTS system, beta-glucoside-specific IIABC component family protein {ECO:0000313|EMBL:EQE59791.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQE59791.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; C
PTS system, beta-glucoside-specific IIABC component family protein n=54 Tax=Clostridium difficile RepID=T3G905_CLODC rbh
NECEvent2014_2_3_scaffold_36_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11914..13347
DNA (1434bp) protein (478aa)
bglA; 6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:CKG82864.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CKG82864.1};; 6-phospho-beta-glucosidase, bglA7 {ECO:0000313|EMBL:CEJ99777.1}; EC=3.2.1.86 {ECO:0000313|EMB
6-phospho-beta-glucosidase n=53 Tax=Clostridium difficile RepID=Q184X3_CLOD6 rbh
NECEvent2014_2_3_scaffold_36_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14052..14930
DNA (879bp) protein (293aa)
putative fructose-1-6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase Fba {ECO:0000313|EMBL:CKG82889.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CKG82889.1};; EC=4.1.2.40 {ECO:0000313|EMBL:CKG82889.1};; Putative fructose-1-6-bisphosphate aldolase {E
Ketose-bisphosphate aldolase family protein n=14 Tax=Clostridium difficile RepID=T3G5T4_CLODC rbh
NECEvent2014_2_3_scaffold_36_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14966..16861
DNA (1896bp) protein (632aa)
PTS system, fructose-like IIABC component (EC:2.7.1.69)
PTS system, fructose-like IIABC component {ECO:0000313|EMBL:CAJ70027.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CAJ70027.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrepto
PTS system, fructose subfamily, IIA component domain protein n=26 Tax=Clostridium difficile RepID=T3G7N5_CLODC rbh
NECEvent2014_2_3_scaffold_36_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17129..19036
DNA (1908bp) protein (636aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Clostridium difficile RepID=T3G941_CLODC rbh
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ70026.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
PTS operon transcription antiterminator
NECEvent2014_2_3_scaffold_36_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19026..19475
DNA (450bp) protein (150aa)
PTS system, fructose subfamily, IIA component domain protein n=55 Tax=Clostridium difficile RepID=T3G521_CLODC
PTS system, fructose-like IIA component
PTS system, fructose-like IIA component {ECO:0000313|EMBL:CAJ70025.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_36_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19575..20462
DNA (888bp) protein (296aa)
Cupin domain protein n=105 Tax=Clostridium difficile RepID=T3G5U4_CLODC rbh
AraC family transcriptional regulator
Cupin domain protein {ECO:0000313|EMBL:EQE59761.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_36_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20867..22315
DNA (1449bp) protein (483aa)
bglA6; 6-phospho-beta-glucosidase, bglA6 (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CKG83068.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CKG83068.1};; 6-phospho-beta-glucosidase, bglA6 {ECO:0000313|EMBL:CEJ99771.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CEJ
Aryl-phospho-beta-D-glucosidase BglH n=10 Tax=Clostridium difficile RepID=T3GA37_CLODC rbh
NECEvent2014_2_3_scaffold_36_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22341..24731
DNA (2391bp) protein (797aa)
Glycosyl hydrolase/phosphorylase {ECO:0000313|EMBL:CAJ70022.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAJ70022.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
Glycosyl hydrolase/phosphorylase (EC:2.4.1.-)
Glycosyl hydrolase family 65 central catalytic domain protein n=7 Tax=Clostridium difficile RepID=T3G953_CLODC rbh
NECEvent2014_2_3_scaffold_36_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24733..25404
DNA (672bp) protein (224aa)
pgmB1; Beta-phosphoglucomutase (beta-D-Glucose1,6-phosphomutase) (EC:5.4.2.6)
Beta-phosphoglucomutase (Beta-D-Glucose 1,6-phosphomutase) {ECO:0000313|EMBL:CAJ70021.1}; EC=5.4.2.6 {ECO:0000313|EMBL:CAJ70021.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridial
Beta-phosphoglucomutase n=36 Tax=Clostridium difficile RepID=T3G531_CLODC rbh
NECEvent2014_2_3_scaffold_36_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25443..26843
DNA (1401bp) protein (467aa)
PTS system beta-glucoside-like transporter subunit IIBC (EC:2.7.1.69)
PTS system transporter subunit IIABC {ECO:0000313|EMBL:CKG83162.1}; PTS system, beta-glucoside-like IIBC component {ECO:0000313|EMBL:CEJ99768.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CEJ99768.1};; TaxID=1496
PTS system, glucose-like IIB component domain protein n=15 Tax=Clostridium difficile RepID=T3G5V3_CLODC rbh
NECEvent2014_2_3_scaffold_36_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27160..28002
DNA (843bp) protein (281aa)
Transcription antiterminator n=176 Tax=Clostridium difficile RepID=C9XQT4_CLODC rbh
transcription antiterminator
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CCL31382.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_36_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28147..30075
DNA (1929bp) protein (643aa)
bglF; PTS system beta-glucoside-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, beta-glucoside-specific IIABC component, bglF4 {ECO:0000313|EMBL:CAJ70018.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CAJ70018.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridia
PTS system, beta-glucoside-specific IIABC component family protein n=6 Tax=Clostridium difficile RepID=T3GA33_CLODC rbh
NECEvent2014_2_3_scaffold_36_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30136..31563
DNA (1428bp) protein (476aa)
bglA; 6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=83 Tax=Clostridium difficile RepID=Q184W2_CLOD6 rbh
Glycosyl hydrolase 1 family protein {ECO:0000313|EMBL:EQE59793.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_36_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31968..32750
DNA (783bp) protein (261aa)
4Fe-4S binding domain protein n=137 Tax=Clostridium difficile RepID=T3G526_CLODC rbh
nitroreductase
4fe-4s binding domain protein {ECO:0000313|EMBL:CEJ99764.1}; Nitroreductase {ECO:0000313|EMBL:CKG83264.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
NECEvent2014_2_3_scaffold_36_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32766..33131
DNA (366bp) protein (122aa)
ArsR-family transcriptional regulator n=175 Tax=Clostridium difficile RepID=C9XQT0_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CAJ70015.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_36_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33297..34046)
DNA (750bp) protein (250aa)
4Fe-4S binding domain protein n=6 Tax=Clostridium difficile RepID=T3G7R6_CLODC rbh
flavodoxin/nitric oxide synthase
Flavodoxin {ECO:0000313|EMBL:CKG83317.1}; Putative flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CEJ99762.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
NECEvent2014_2_3_scaffold_36_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34224..34376
DNA (153bp) protein (51aa)
Uncharacterized protein n=43 Tax=Clostridium difficile RepID=Q184V7_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL23510.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_36_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34504..34929
DNA (426bp) protein (142aa)
Transcriptional regulator, AbrB family domain protein n=82 Tax=Clostridium difficile RepID=T3G5Z4_CLODC
Transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:CAJ70012.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_36_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34961..36148
DNA (1188bp) protein (396aa)
Glycosyltransferase, MGT family protein n=61 Tax=Clostridium difficile RepID=T3G7Y3_CLODC rbh
putative UDP-glycosyltransferase, MGT subfamily
Putative UDP-glycosyltransferase, MGT subfamily {ECO:0000313|EMBL:CCL23508.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_36_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36340..36744
DNA (405bp) protein (135aa)
Uncharacterized protein n=86 Tax=Clostridium difficile RepID=Q184V5_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG74166.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_36_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37137..37280
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS89630.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_36_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37543..38403
DNA (861bp) protein (287aa)
PRD domain protein n=74 Tax=Clostridium difficile RepID=C9XQS0_CLODC rbh
bglG; beta-glucoside bgl operon transcription antiterminator
Putative beta-glucoside bgl operon transcription antiterminator {ECO:0000313|EMBL:CBE06658.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
Displaying items 1-30 of 64 in total

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